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Update uv.lock + CI tweaks + fix pymatgen issue #5027

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Update uv.lock + CI tweaks + fix pymatgen issue

Update uv.lock + CI tweaks + fix pymatgen issue #5027

Run time

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Job Run time
install-with-conda (3.9, true)
39s
install-with-pip
22s
install-with-conda (3.10, true)
53s
install-with-pip ([atomic_tools,docs,notebook,rest,tests,tui])
1m 20s
validate-dependency-specification
16s
install-with-conda (3.11, true)
48s
install-with-conda (3.12, true)
46s
install-with-conda (false)
38s
create-conda-environment
30s
tests (3.9)
15m 13s
tests (3.10)
14m 52s
tests (3.11)
15m 3s
tests (3.12)
15m 20s
1h 6m 40s