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@paleopollen

Punyasena Paleoecology and Palynology Lab

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  1. palyim-omero-docker palyim-omero-docker Public

    Forked from ome/docker-example-omero

    OMERO Docker Compose Repo for PALYIM

    Shell

  2. ndpi-tile-cropper-cli ndpi-tile-cropper-cli Public

    Forked from fengzard/open_world_pollen_detection

    A Python-based command-line application for splitting Hamamatsu NanoZoomer Digital Pathology Image (NDPI) format images into cropped tile images.

    Python

Repositories

Showing 8 of 8 repositories
  • segment-anything-2 Public Forked from facebookresearch/sam2

    The repository provides code for running inference with the Meta Segment Anything Model 2 (SAM 2), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.

    paleopollen/segment-anything-2’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 1,309 0 2 Updated Dec 17, 2024
  • ndpi-tile-cropper-cli Public Forked from fengzard/open_world_pollen_detection

    A Python-based command-line application for splitting Hamamatsu NanoZoomer Digital Pathology Image (NDPI) format images into cropped tile images.

    paleopollen/ndpi-tile-cropper-cli’s past year of commit activity
    Python 0 Apache-2.0 3 0 0 Updated Dec 16, 2024
  • pollen-detection-cli Public Forked from fengzard/open_world_pollen_detection

    A Python-based command-line application for detecting pollen grains from image stacks.

    paleopollen/pollen-detection-cli’s past year of commit activity
    Python 0 Apache-2.0 3 0 1 Updated Dec 16, 2024
  • Pollen_Diversity_Dynamics Public

    Code for a variety of pollen recognition tasks, including classification, quantification of morphological diversity within Poaceae pollen communities, and identification of the photosynthetic pathway (C3 or C4) based solely on morphological traits.

    paleopollen/Pollen_Diversity_Dynamics’s past year of commit activity
    Python 0 0 0 0 Updated Sep 17, 2024
  • Novel_Pollen_Phylogenetic_Placement Public

    Code for a variety of pollen recognition tasks, including classification, novelty detection, and phylogenetic placement

    paleopollen/Novel_Pollen_Phylogenetic_Placement’s past year of commit activity
    Jupyter Notebook 2 1 0 0 Updated Jul 11, 2023
  • open_world_pollen_detection Public Forked from fengzard/open_world_pollen_detection

    Deep learning and pollen detection in the Open World

    paleopollen/open_world_pollen_detection’s past year of commit activity
    Jupyter Notebook 0 3 0 0 Updated May 4, 2023
  • palyim-omero-docker Public Forked from ome/docker-example-omero

    OMERO Docker Compose Repo for PALYIM

    paleopollen/palyim-omero-docker’s past year of commit activity
    Shell 0 BSD-2-Clause 27 0 0 Updated Apr 20, 2023
  • clowder Public Forked from clowder-framework/clowder

    A data management system that allows users to share, annotate, organize and analyze large collections of datasets. It provides support for extensible metadata annotation using JSON-LD and a distribute analytics event bus for automatic curation of uploaded data.

    paleopollen/clowder’s past year of commit activity
    JavaScript 0 NCSA 18 0 0 Updated Mar 2, 2023

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