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Updated NPAtlas to 2024-03 version #146

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merged 2 commits into from
Aug 6, 2024
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Merged

Updated NPAtlas to 2024-03 version #146

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b14e49e
Updated NPAtlas to 2024_03
schymane Aug 1, 2024
9d286dc
shifted order
schymane Aug 1, 2024
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12 changes: 6 additions & 6 deletions Dockerfile
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Original file line number Diff line number Diff line change
Expand Up @@ -27,8 +27,6 @@ RUN set -eux; \
RUN mkdir -p /vol/file_databases; cd /vol/file_databases && \
wget -q https://zenodo.org/records/3548461/files/NORMANSusDat_20Nov2019.csv && \
touch NORMANSusDat_20Nov2019.csv && \
wget -q https://zenodo.org/records/3520106/files/NPAtlas_Aug2019.csv && \
touch NPAtlas_Aug2019.csv && \
wget -q https://zenodo.org/records/3364464/files/CompTox_07March19_SmokingMetaData.csv && \
touch CompTox_07March19_SmokingMetaData.csv && \
wget -q https://zenodo.org/records/6475906/files/CompTox_07March19_SelectMetaData.csv && \
Expand All @@ -45,10 +43,10 @@ RUN mkdir -p /vol/file_databases; cd /vol/file_databases && \
touch WormJam_10Sept19.csv && \
wget -q https://zenodo.org/records/3375500/files/HMDB4_23Aug19.csv && \
touch HMDB4_23Aug19.csv
wget -q https://zenodo.org/records/3564602/files/BloodExposomeDB_03Dec2019.csv && \
touch BloodExposomeDB_03Dec2019.csv && \

RUN cd /vol/file_databases && \
wget -q https://zenodo.org/records/3564602/files/BloodExposomeDB_03Dec2019.csv && \
touch BloodExposomeDB_03Dec2019.csv && \
wget -q https://zenodo.org/records/3957497/files/HBM4EU_CECscreen_MF_1Jul2020_plusTPs.csv && \
touch HBM4EU_CECscreen_MF_1Jul2020_plusTPs.csv && \
wget -q https://zenodo.org/records/3957497/files/HBM4EU_CECscreen_MF_1Jul2020.csv && \
Expand All @@ -59,12 +57,14 @@ RUN cd /vol/file_databases && \
touch OntoChem_PFAS_CORE_20220420.csv && \
wget -q https://zenodo.org/records/7922070/files/CyanoMetDB_v02_2023_MetFrag.csv && \
touch CyanoMetDB_v02_2023_MetFrag.csv && \
wget -q https://zenodo.org/records/12908412/files/PubChem_OECDPFAS_largerPFASparts_20240726.csv && \
touch PubChem_OECDPFAS_largerPFASparts_20240726.csv && \
wget -q https://zenodo.org/records/5336447/files/COCONUT4MetFrag_april.csv && \
touch COCONUT4MetFrag_april.csv && \
wget -q https://zenodo.org/records/8144127/files/LIPIDMAPS_20230712.csv && \
touch LIPIDMAPS_20230712.csv && \
wget -q https://zenodo.org/records/12908412/files/PubChem_OECDPFAS_largerPFASparts_20240726.csv && \
touch PubChem_OECDPFAS_largerPFASparts_20240726.csv && \
wget -q https://zenodo.org/records/13148840/files/NPAtlas_2024_03.csv && \
touch NPAtlas_2024_03.csv && \
wget -q https://zenodo.org/records/12730936/files/PubChemLite_CCSbase_20240628.csv && \
touch PubChemLite_CCSbase_20240628.csv && \
wget -q https://zenodo.org/records/12899991/files/PubChemLite_exposomics_20240726.csv && \
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