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Remove MMTF usage #226

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Triggered via pull request March 28, 2024 16:07

padix-key

opened #544

padix-key:mmtf-removal

Status Failure

Total duration 12m 54s

Artifacts 2

test_and_deploy.yml

on: pull_request

Generate wheels matrix

Build documentation

Test interfaces to databases and applications

Test interface to Muscle 5

Build source distribution

Compile the CCD subset for structure.info from the wwPDB CCD

Matrix: Build & Test

Upload documentation to GitHub Releases

Upload package to GitHub Releases & PyPI

Annotations

12 errors and 13 warnings

Test interfaces to databases and applications

Process completed with exit code 1.

Compile the CCD subset for structure.info from the wwPDB CCD

Process completed with exit code 1.

Build & Test (cp312-win_amd64, windows-2019)

Command pytest D:\a\biotite\biotite --durations=50 --ignore=D:\a\biotite\biotite//tests//structure//test_trajectory.py --ignore=D:\a\biotite\biotite//tests//sequence//align//test_statistics.py --ignore=D:\a\biotite\biotite//tests//application --ignore=D:\a\biotite\biotite//tests//database --ignore=D:\a\biotite\biotite//tests//test_doctest.py --ignore=D:\a\biotite\biotite//tests//test_modname.py

Build & Test (cp312-win_amd64, windows-2019)

Process completed with exit code 1.

Build & Test (cp310-win_amd64, windows-2019)

The job was canceled because "cp312-win_amd64_windows-2" failed.

Build & Test (cp311-win_amd64, windows-2019)

The job was canceled because "cp312-win_amd64_windows-2" failed.

Build & Test (cp311-manylinux_x86_64, ubuntu-20.04)

The job was canceled because "cp312-win_amd64_windows-2" failed.

Build & Test (cp310-manylinux_x86_64, ubuntu-20.04)

The job was canceled because "cp312-win_amd64_windows-2" failed.

Build & Test (cp312-manylinux_x86_64, ubuntu-20.04)

The job was canceled because "cp312-win_amd64_windows-2" failed.

Build & Test (cp310-macosx_x86_64, macos-11)

The job was canceled because "cp312-win_amd64_windows-2" failed.

Build & Test (cp311-macosx_x86_64, macos-11)

The job was canceled because "cp312-win_amd64_windows-2" failed.

Build & Test (cp312-macosx_x86_64, macos-11)

The job was canceled because "cp312-win_amd64_windows-2" failed.

Build source distribution

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Test interface to Muscle 5

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: conda-incubator/setup-miniconda@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Test interface to Muscle 5

Mamba support is still experimental and can result in differently solved environments!

Test interfaces to databases and applications

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: conda-incubator/setup-miniconda@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Test interfaces to databases and applications

Mamba support is still experimental and can result in differently solved environments!

Compile the CCD subset for structure.info from the wwPDB CCD

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: conda-incubator/setup-miniconda@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Compile the CCD subset for structure.info from the wwPDB CCD

Mamba support is still experimental and can result in differently solved environments!

Build documentation

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: conda-incubator/setup-miniconda@v2, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Build documentation

Mamba support is still experimental and can result in differently solved environments!

Upload documentation to GitHub Releases

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/download-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Build & Test (cp311-macosx_arm64, macos-11)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Build & Test (cp312-macosx_arm64, macos-11)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Build & Test (cp310-macosx_arm64, macos-11)

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

Artifacts

Produced during runtime

Name	Size
documentation Expired	67.9 MB
release Expired	95.6 MB