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8 changes: 6 additions & 2 deletions README.rst
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Trident: Aquarium API Scripting
===============================

`CircleCI <https://circleci.com/gh/klavinslab/trident/tree/master>`__
`PyPI version <https://badge.fury.io/py/pydent>`__
|CircleCI| |PyPI version|

Trident is the python API scripting for Aquarium.

Expand Down Expand Up @@ -102,3 +101,8 @@ Available nested relationships
primer_type = mysession.SampleType.find(1)
print(primer_type.relationships)
.. |CircleCI| image:: https://circleci.com/gh/klavinslab/trident/tree/master.svg?style=svg&circle-token=88677c59698d55a127a080cba9ca025cf8072f6c
:target: https://circleci.com/gh/klavinslab/trident/tree/master
.. |PyPI version| image:: https://badge.fury.io/py/pydent.svg
:target: https://badge.fury.io/py/pydent
2 changes: 1 addition & 1 deletion docs/.buildinfo
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@@ -1,4 +1,4 @@
# Sphinx build info version 1
# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
config: 888b6eac69eb9de5a452ee5526b9e88d
config: 63f8260942de61e2ed5bbd66b876f1e8
tags: 645f666f9bcd5a90fca523b33c5a78b7
13 changes: 7 additions & 6 deletions docs/_modules/index.html
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<head>
<meta http-equiv="X-UA-Compatible" content="IE=Edge" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<title>Overview: module code &#8212; Trident 0.0.33 documentation</title>
<title>Overview: module code &#8212; Trident 0.0.34 documentation</title>
<link rel="stylesheet" href="../_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="../_static/pygments.css" type="text/css" />
<script type="text/javascript" id="documentation_options" data-url_root="../" src="../_static/documentation_options.js"></script>
<script type="text/javascript" src="../_static/jquery.js"></script>
<script type="text/javascript" src="../_static/underscore.js"></script>
<script type="text/javascript" src="../_static/doctools.js"></script>
<script async="async" type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
<link rel="index" title="Index" href="../genindex.html" />
<link rel="search" title="Search" href="../search.html" />
</head><body>
Expand All @@ -25,22 +26,22 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../index.html">Trident 0.0.33 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../index.html">Trident 0.0.34 documentation</a> &#187;</li>
</ul>
</div>
<div class="sphinxsidebar" role="navigation" aria-label="main navigation">
<div class="sphinxsidebarwrapper"><p class="sidebar-subtitle">
<a href="../index.html">
<h1>Trident</h1>
<h2>0.0.33</h2>
<h2>0.0.34</h2>
</a>
</p>

<p>
Trident is a python scripting API wrapper for Aquarium. With Trident,
you can create python scripts and apps that mine data, create samples,
submit laboratory protocols, and more. You are looking at documentation
for version <b>0.0.33</b>.
for version <b>0.0.34</b>.
</p>
<div>
<a href="https://circleci.com/gh/klavinslab/trident/tree/master"><img src="https://circleci.com/gh/klavinslab/trident.svg?style=svg" alt="build status"></a>
Expand Down Expand Up @@ -95,12 +96,12 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../index.html">Trident 0.0.33 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../index.html">Trident 0.0.34 documentation</a> &#187;</li>
</ul>
</div>
<div class="footer" role="contentinfo">
&#169; Copyright 2017, University of Washington.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.7.5.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.8.0.
</div>
</body>
</html>
13 changes: 7 additions & 6 deletions docs/_modules/marshmallow/fields.html
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<head>
<meta http-equiv="X-UA-Compatible" content="IE=Edge" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<title>marshmallow.fields &#8212; Trident 0.0.33 documentation</title>
<title>marshmallow.fields &#8212; Trident 0.0.34 documentation</title>
<link rel="stylesheet" href="../../_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="../../_static/pygments.css" type="text/css" />
<script type="text/javascript" id="documentation_options" data-url_root="../../" src="../../_static/documentation_options.js"></script>
<script type="text/javascript" src="../../_static/jquery.js"></script>
<script type="text/javascript" src="../../_static/underscore.js"></script>
<script type="text/javascript" src="../../_static/doctools.js"></script>
<script async="async" type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
<link rel="index" title="Index" href="../../genindex.html" />
<link rel="search" title="Search" href="../../search.html" />
</head><body>
Expand All @@ -25,23 +26,23 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.33 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.34 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../index.html" accesskey="U">Module code</a> &#187;</li>
</ul>
</div>
<div class="sphinxsidebar" role="navigation" aria-label="main navigation">
<div class="sphinxsidebarwrapper"><p class="sidebar-subtitle">
<a href="../../index.html">
<h1>Trident</h1>
<h2>0.0.33</h2>
<h2>0.0.34</h2>
</a>
</p>

<p>
Trident is a python scripting API wrapper for Aquarium. With Trident,
you can create python scripts and apps that mine data, create samples,
submit laboratory protocols, and more. You are looking at documentation
for version <b>0.0.33</b>.
for version <b>0.0.34</b>.
</p>
<div>
<a href="https://circleci.com/gh/klavinslab/trident/tree/master"><img src="https://circleci.com/gh/klavinslab/trident.svg?style=svg" alt="build status"></a>
Expand Down Expand Up @@ -1388,13 +1389,13 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.33 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.34 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../index.html" >Module code</a> &#187;</li>
</ul>
</div>
<div class="footer" role="contentinfo">
&#169; Copyright 2017, University of Washington.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.7.5.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.8.0.
</div>
</body>
</html>
13 changes: 7 additions & 6 deletions docs/_modules/marshmallow/schema.html
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<head>
<meta http-equiv="X-UA-Compatible" content="IE=Edge" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<title>marshmallow.schema &#8212; Trident 0.0.33 documentation</title>
<title>marshmallow.schema &#8212; Trident 0.0.34 documentation</title>
<link rel="stylesheet" href="../../_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="../../_static/pygments.css" type="text/css" />
<script type="text/javascript" id="documentation_options" data-url_root="../../" src="../../_static/documentation_options.js"></script>
<script type="text/javascript" src="../../_static/jquery.js"></script>
<script type="text/javascript" src="../../_static/underscore.js"></script>
<script type="text/javascript" src="../../_static/doctools.js"></script>
<script async="async" type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
<link rel="index" title="Index" href="../../genindex.html" />
<link rel="search" title="Search" href="../../search.html" />
</head><body>
Expand All @@ -25,23 +26,23 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.33 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.34 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../index.html" accesskey="U">Module code</a> &#187;</li>
</ul>
</div>
<div class="sphinxsidebar" role="navigation" aria-label="main navigation">
<div class="sphinxsidebarwrapper"><p class="sidebar-subtitle">
<a href="../../index.html">
<h1>Trident</h1>
<h2>0.0.33</h2>
<h2>0.0.34</h2>
</a>
</p>

<p>
Trident is a python scripting API wrapper for Aquarium. With Trident,
you can create python scripts and apps that mine data, create samples,
submit laboratory protocols, and more. You are looking at documentation
for version <b>0.0.33</b>.
for version <b>0.0.34</b>.
</p>
<div>
<a href="https://circleci.com/gh/klavinslab/trident/tree/master"><img src="https://circleci.com/gh/klavinslab/trident.svg?style=svg" alt="build status"></a>
Expand Down Expand Up @@ -1049,13 +1050,13 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.33 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.34 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../index.html" >Module code</a> &#187;</li>
</ul>
</div>
<div class="footer" role="contentinfo">
&#169; Copyright 2017, University of Washington.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.7.5.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.8.0.
</div>
</body>
</html>
13 changes: 7 additions & 6 deletions docs/_modules/pydent/aqhttp.html
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<head>
<meta http-equiv="X-UA-Compatible" content="IE=Edge" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<title>pydent.aqhttp &#8212; Trident 0.0.33 documentation</title>
<title>pydent.aqhttp &#8212; Trident 0.0.34 documentation</title>
<link rel="stylesheet" href="../../_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="../../_static/pygments.css" type="text/css" />
<script type="text/javascript" id="documentation_options" data-url_root="../../" src="../../_static/documentation_options.js"></script>
<script type="text/javascript" src="../../_static/jquery.js"></script>
<script type="text/javascript" src="../../_static/underscore.js"></script>
<script type="text/javascript" src="../../_static/doctools.js"></script>
<script async="async" type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
<link rel="index" title="Index" href="../../genindex.html" />
<link rel="search" title="Search" href="../../search.html" />
</head><body>
Expand All @@ -25,23 +26,23 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.33 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.34 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../index.html" accesskey="U">Module code</a> &#187;</li>
</ul>
</div>
<div class="sphinxsidebar" role="navigation" aria-label="main navigation">
<div class="sphinxsidebarwrapper"><p class="sidebar-subtitle">
<a href="../../index.html">
<h1>Trident</h1>
<h2>0.0.33</h2>
<h2>0.0.34</h2>
</a>
</p>

<p>
Trident is a python scripting API wrapper for Aquarium. With Trident,
you can create python scripts and apps that mine data, create samples,
submit laboratory protocols, and more. You are looking at documentation
for version <b>0.0.33</b>.
for version <b>0.0.34</b>.
</p>
<div>
<a href="https://circleci.com/gh/klavinslab/trident/tree/master"><img src="https://circleci.com/gh/klavinslab/trident.svg?style=svg" alt="build status"></a>
Expand Down Expand Up @@ -341,13 +342,13 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.33 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.34 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../index.html" >Module code</a> &#187;</li>
</ul>
</div>
<div class="footer" role="contentinfo">
&#169; Copyright 2017, University of Washington.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.7.5.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.8.0.
</div>
</body>
</html>
13 changes: 7 additions & 6 deletions docs/_modules/pydent/aqsession.html
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<head>
<meta http-equiv="X-UA-Compatible" content="IE=Edge" />
<meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
<title>pydent.aqsession &#8212; Trident 0.0.33 documentation</title>
<title>pydent.aqsession &#8212; Trident 0.0.34 documentation</title>
<link rel="stylesheet" href="../../_static/sphinxdoc.css" type="text/css" />
<link rel="stylesheet" href="../../_static/pygments.css" type="text/css" />
<script type="text/javascript" id="documentation_options" data-url_root="../../" src="../../_static/documentation_options.js"></script>
<script type="text/javascript" src="../../_static/jquery.js"></script>
<script type="text/javascript" src="../../_static/underscore.js"></script>
<script type="text/javascript" src="../../_static/doctools.js"></script>
<script async="async" type="text/javascript" src="https://cdnjs.cloudflare.com/ajax/libs/mathjax/2.7.1/MathJax.js?config=TeX-AMS-MML_HTMLorMML"></script>
<link rel="index" title="Index" href="../../genindex.html" />
<link rel="search" title="Search" href="../../search.html" />
</head><body>
Expand All @@ -25,23 +26,23 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.33 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.34 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../index.html" accesskey="U">Module code</a> &#187;</li>
</ul>
</div>
<div class="sphinxsidebar" role="navigation" aria-label="main navigation">
<div class="sphinxsidebarwrapper"><p class="sidebar-subtitle">
<a href="../../index.html">
<h1>Trident</h1>
<h2>0.0.33</h2>
<h2>0.0.34</h2>
</a>
</p>

<p>
Trident is a python scripting API wrapper for Aquarium. With Trident,
you can create python scripts and apps that mine data, create samples,
submit laboratory protocols, and more. You are looking at documentation
for version <b>0.0.33</b>.
for version <b>0.0.34</b>.
</p>
<div>
<a href="https://circleci.com/gh/klavinslab/trident/tree/master"><img src="https://circleci.com/gh/klavinslab/trident.svg?style=svg" alt="build status"></a>
Expand Down Expand Up @@ -218,13 +219,13 @@ <h3>Navigation</h3>
<li class="right" >
<a href="../../py-modindex.html" title="Python Module Index"
>modules</a> |</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.33 documentation</a> &#187;</li>
<li class="nav-item nav-item-0"><a href="../../index.html">Trident 0.0.34 documentation</a> &#187;</li>
<li class="nav-item nav-item-1"><a href="../index.html" >Module code</a> &#187;</li>
</ul>
</div>
<div class="footer" role="contentinfo">
&#169; Copyright 2017, University of Washington.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.7.5.
Created using <a href="http://sphinx-doc.org/">Sphinx</a> 1.8.0.
</div>
</body>
</html>
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