Drop empty values in seed_dict (#71)

* drop empty values in seed_dict

* update to version 0.1.14

pandasaurus_cxg/anndata_enricher.py

@@ -47,7 +47,7 @@ def __init__(
         # TODO Do we need to keep whole anndata? Would it be enough to keep the obs only?
         self.anndata = anndata
         self.seed_dict = dict(
-            self.anndata.obs.drop_duplicates(subset=[cell_type_field, "cell_type"])[
+            self.anndata.obs.drop_duplicates(subset=[cell_type_field, "cell_type"]).dropna()[
                 [cell_type_field, "cell_type"]
             ].values
         )

pyproject.toml

@@ -1,6 +1,6 @@
 [tool.poetry]
 name = "pandasaurus-cxg"
-version = "0.1.13"
+version = "0.1.14"
 description = "Ontology enrichment tool for CxG standard AnnData files."
 authors = ["Ugur Bayindir <[email protected]>"]
 license = "http://www.apache.org/licenses/LICENSE-2.0"