From b04f2bbdcb85c516144cea617d713d671c79a03f Mon Sep 17 00:00:00 2001 From: Marcin Magnus Date: Sat, 10 Jul 2021 18:49:50 +0200 Subject: [PATCH] Add files via upload --- rna_tools/tools/automatix/README.md | 10 ++ .../tools/automatix/after_peyote_clean.sh | 5 + rna_tools/tools/automatix/automatix.py | 60 +++++++++ rna_tools/tools/automatix/chunker.py | 21 ++++ rna_tools/tools/automatix/clean.sh | 5 + rna_tools/tools/automatix/evox.py | 62 ++++++++++ rna_tools/tools/automatix/inf_all.py | 17 +++ rna_tools/tools/automatix/mass_inf.py | 17 +++ .../automatix/mqaprna_massive_destruction.py | 89 ++++++++++++++ rna_tools/tools/automatix/mqaprna_run copy.sh | 1 + rna_tools/tools/automatix/mqaprna_run.sh | 1 + rna_tools/tools/automatix/pdb_list.txt | 1 + rna_tools/tools/automatix/pdb_list.txt~ | 1 + .../automatix/rm_csvs_smaller_than_2k.sh | 1 + rna_tools/tools/automatix/rm_less_2k.sh | 1 + rna_tools/tools/automatix/rp13_automatix.py | 76 ++++++++++++ rna_tools/tools/automatix/run | 114 ++++++++++++++++++ rna_tools/tools/automatix/run.sh | 6 + rna_tools/tools/automatix/run_1 | 1 + rna_tools/tools/automatix/test.sh | 1 + .../automatix/xxdownload_job_and_process.py | 38 ++++++ 21 files changed, 528 insertions(+) create mode 100644 rna_tools/tools/automatix/README.md create mode 100644 rna_tools/tools/automatix/after_peyote_clean.sh create mode 100644 rna_tools/tools/automatix/automatix.py create mode 100644 rna_tools/tools/automatix/chunker.py create mode 100644 rna_tools/tools/automatix/clean.sh create mode 100644 rna_tools/tools/automatix/evox.py create mode 100644 rna_tools/tools/automatix/inf_all.py create mode 100644 rna_tools/tools/automatix/mass_inf.py create mode 100644 rna_tools/tools/automatix/mqaprna_massive_destruction.py create mode 100644 rna_tools/tools/automatix/mqaprna_run copy.sh create mode 100644 rna_tools/tools/automatix/mqaprna_run.sh create mode 100644 rna_tools/tools/automatix/pdb_list.txt create mode 100644 rna_tools/tools/automatix/pdb_list.txt~ create mode 100644 rna_tools/tools/automatix/rm_csvs_smaller_than_2k.sh create mode 100644 rna_tools/tools/automatix/rm_less_2k.sh create mode 100644 rna_tools/tools/automatix/rp13_automatix.py create mode 100644 rna_tools/tools/automatix/run create mode 100644 rna_tools/tools/automatix/run.sh create mode 100644 rna_tools/tools/automatix/run_1 create mode 100644 rna_tools/tools/automatix/test.sh create mode 100644 rna_tools/tools/automatix/xxdownload_job_and_process.py diff --git a/rna_tools/tools/automatix/README.md b/rna_tools/tools/automatix/README.md new file mode 100644 index 000000000..471c2234d --- /dev/null +++ b/rna_tools/tools/automatix/README.md @@ -0,0 +1,10 @@ +# automatix +xx or makex + +``` +[mm] evox$ git:(master) ✗ xxdownload_job_and_process.py ade ade_cp15-ca11f0d6 +mkdir: simrna_ade_cp15-ca11f0d6: File exists +/usr/local/lib/python2.7/site-packages/urllib3/connectionpool.py:858: InsecureRequestWarning: Unverified HTTPS request is being made. Adding certificate verification is strongly advised. See: https://urllib3.readthedocs.io/en/latest/advanced-usage.html#ssl-warnings + InsecureRequestWarning) +['ade_cp15', 'ca11f0d6', 'thrs6.50A_clust04X. +``` diff --git a/rna_tools/tools/automatix/after_peyote_clean.sh b/rna_tools/tools/automatix/after_peyote_clean.sh new file mode 100644 index 000000000..8bb2e92fb --- /dev/null +++ b/rna_tools/tools/automatix/after_peyote_clean.sh @@ -0,0 +1,5 @@ +yes | rm *.e4* +yes | rm *.o4* +yes | rm *.po* +yes | rm *.o4* +yes | rm *.pe* diff --git a/rna_tools/tools/automatix/automatix.py b/rna_tools/tools/automatix/automatix.py new file mode 100644 index 000000000..53f5668f4 --- /dev/null +++ b/rna_tools/tools/automatix/automatix.py @@ -0,0 +1,60 @@ +#!/usr/bin/env python +# -*- coding: utf-8 -*- +""" +/home/magnus/rna-evo-malibu/ade # run here not up +""" +from __future__ import print_function + +import argparse +import os +import glob + + +def get_parser(): + parser = argparse.ArgumentParser( + description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) + + parser.add_argument('-d', "--dryrun", + action="store_true", help="dry run", default=False) + + parser.add_argument('-p', '--path', help="", default='') + parser.add_argument('-c', '--case', help="only one case, for test", default="*") + parser.add_argument('-e', '--exe', help="only one case, for test") + parser.add_argument("-v", "--verbose", + action="store_true", help="be verbose") + return parser + +def exe(cmd, dryrun=False): + print(cmd) + if not dryrun: os.system(cmd) + +if __name__ == '__main__': + parser = get_parser() + args = parser.parse_args() + + if args.path: + os.chdir(args.path) + root = os.getcwd() + cases = glob.glob(args.case)# '*') + for c in cases: + print('Case: ', c) + # mode only for a specific case + #if args.case: # only if this is used + # if c != args.case: + # print('!!! skip ' + c + '!!!') + # continue + + # if not break ed, use this + if os.path.isdir(c): + print ('Inside %s' % c) + os.chdir(c) # go inside a folder + if args.exe: + exe(args.exe) + #subcases = glob.glob('*.fa') + #for sc in subcases: + ## for i in [1000]: # + ## exe('rm *min.out.*.pdb', dryrun) + ## exe('mkdir %s_top%i' % (c, i), dryrun) + ## exe('extract_lowscore_decoys.py *min.out %i' % (i), dryrun) + ## exe('mv -v *min.out.*.pdb %s_top%i' % (c, i), dryrun) + ## os.chdir(root) diff --git a/rna_tools/tools/automatix/chunker.py b/rna_tools/tools/automatix/chunker.py new file mode 100644 index 000000000..1a36b8894 --- /dev/null +++ b/rna_tools/tools/automatix/chunker.py @@ -0,0 +1,21 @@ + + + +def chunks(l, n): + """Yield successive n-sized chunks from l.""" + for i in range(0, len(l), n): + yield l[i:i + n] + +#main +f = open('pdb_list.txt').read().split() +# 30 = runs * 10 = 300cores +no_of_files = int(round(len(f) / 100)) +c = 0 +for i in chunks(f, no_of_files): + txt = "echo '" + # -g farna_hires.csv + txt += "/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_" + str(c) + " " + " ".join(i) +"'" + txt += " | qsub -N mq" + str(c) + " -V -cwd -pe mpi 1" + print txt + c += 1 + diff --git a/rna_tools/tools/automatix/clean.sh b/rna_tools/tools/automatix/clean.sh new file mode 100644 index 000000000..8bb2e92fb --- /dev/null +++ b/rna_tools/tools/automatix/clean.sh @@ -0,0 +1,5 @@ +yes | rm *.e4* +yes | rm *.o4* +yes | rm *.po* +yes | rm *.o4* +yes | rm *.pe* diff --git a/rna_tools/tools/automatix/evox.py b/rna_tools/tools/automatix/evox.py new file mode 100644 index 000000000..5b58077d3 --- /dev/null +++ b/rna_tools/tools/automatix/evox.py @@ -0,0 +1,62 @@ +#!/usr/bin/env python +# -*- coding: utf-8 -*- +""" +/home/magnus/rna-evo-malibu/ade # run here not up +""" +from __future__ import print_function + +import argparse +import os +import glob + + +def get_parser(): + parser = argparse.ArgumentParser( + description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) + + parser.add_argument('-d', "--dryrun", + action="store_true", help="dry run", default=False) + + parser.add_argument('-p', '--path', help="", default='') + parser.add_argument('-c', '--case', help="only one case, for test") + parser.add_argument("-v", "--verbose", + action="store_true", help="be verbose") + + return parser + +def exe(cmd, dryrun): + print(cmd) + if not dryrun: os.system(cmd) + +def main(dryrun, path, case): + if path: + os.chdir(path) + root = os.getcwd() + cases = glob.glob('*') + for c in cases: + print('Case: ', c) + # mode only for a specific case + if case: # only if this is used + if c != case: + print('!!! skip ' + c + '!!!') + continue + + # if not break ed, use this + if os.path.isdir(c): + print ('Inside %s' % c) + os.chdir(c) # go inside a folder + # cmd + #subcases = glob.glob('*.fa') + #for sc in subcases: + for i in [1000]: # + exe('rm *min.out.*.pdb', dryrun) + exe('mkdir %s_top%i' % (c, i), dryrun) + exe('extract_lowscore_decoys.py *min.out %i' % (i), dryrun) + exe('mv -v *min.out.*.pdb %s_top%i' % (c, i), dryrun) + os.chdir(root) + +if __name__ == '__main__': + parser = get_parser() + args = parser.parse_args() + + main(args.dryrun, args.path, args.case) diff --git a/rna_tools/tools/automatix/inf_all.py b/rna_tools/tools/automatix/inf_all.py new file mode 100644 index 000000000..e3a6ec060 --- /dev/null +++ b/rna_tools/tools/automatix/inf_all.py @@ -0,0 +1,17 @@ +#!/usr/bin/env python +import os +import glob + +def main(): + root = os.getcwd() + pdbs = glob.glob('*') + for p in pdbs: + if os.path.isdir(p): + os.chdir(p) # go inside a folder + cmd = 'rna_calc_inf.py -t struc/' + p + '_M1.pdb struc/*.pdb' + print cmd + os.system(cmd) + os.chdir(root) + +if __name__ == '__main__': + main() diff --git a/rna_tools/tools/automatix/mass_inf.py b/rna_tools/tools/automatix/mass_inf.py new file mode 100644 index 000000000..d25487563 --- /dev/null +++ b/rna_tools/tools/automatix/mass_inf.py @@ -0,0 +1,17 @@ +#!/usr/bin/env python +import os +import glob + +def main(): + root = os.getcwd() + pdbs = glob.glob('*') + for p in pdbs: + if os.path.isdir(p): + os.chdir(p) # go inside a folder + cmd = 'rna_calc_inf.py -t struc/' + p + '_M1.pdb struc/*.pdb' + print cmd + #os.system + os.chdir(root) + +if __name__ == '__main__': + main() diff --git a/rna_tools/tools/automatix/mqaprna_massive_destruction.py b/rna_tools/tools/automatix/mqaprna_massive_destruction.py new file mode 100644 index 000000000..abb720b61 --- /dev/null +++ b/rna_tools/tools/automatix/mqaprna_massive_destruction.py @@ -0,0 +1,89 @@ +#!/usr/bin/python +#!/usr/bin/env python +# -*- coding: utf-8 -*- +""" +1 - method +2 - cpu +3 - "_X.csv' (without csv + + print "1 - method, 2 - cpu, 3 - '_X.csv' (without csv) 4 - run 5 - method_code, e.g. Fhi" +""" +from __future__ import print_function + +import argparse +import sys +import os +import glob + + +def get_parser(): + parser = argparse.ArgumentParser( + description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) + + #parser.add_argument('-', "--", help="", default="") + + parser.add_argument("-v", "--verbose", + action="store_true", help="be verbose") + parser.add_argument("method") + parser.add_argument("cpu", type=int) + parser.add_argument("--run", action="store_true") # nargs='+') + parser.add_argument("path") + parser.add_argument("--subfolder", default="struc", help="struc in this case /home/mqapRNA/mqaprna_datasets/rasp/2nueC/struc/2nueC_M10.pdb") + parser.add_argument("dirs", nargs='+')# help="", default="") # + return parser + + +if __name__ == '__main__': + parser = get_parser() + args = parser.parse_args() + + missing = '' + + files = os.listdir(PATH) + method = args.method + cpu = int(args.cpu) + method_code = ''#sys.argv[5] + + for f in args.dirs: + if os.path.isdir(f): + print('#' * 80) + print(f) + if missing: + if f not in missing.split(','): + continue + + #cmd = 'cp -v ' + f + '/' + f + '.pdb ' + f + '/struc/' + #print cmd + #cmd = "mqaprna.py -n 1a9nR/1a9nR.pdb 1a9nR/struc/ 1a9nR" + #cmd = "mqaprna.py -m 6 -t SimRNA_1 " + f + '/struc ' + f + '_simrna_1_' + + #cmd = "mqaprna.py -m " + str(cpu) + " -g /home/magnus/mqaprna_decoys/rasp/" + f + '_' + method + "-v0.3-48-g80cbfc0-dirty.csv -t " + method + " " + PATH + f + '/struc ' + PATH + '_' + f + '_' + method + + pattern = path + '/*' + f + '*' + method + '**csv' + print(pattern) + csvfn_to_ignore = glob.glob(pattern) + print(csvfn_to_ignore) + if len(csvfn_to_ignore) > 0: + g = " -g " + csvfn_to_ignore[0] + else: + print('nothing to ignore...') + g = '' + #g = '' # g hack! + + if cpu > 0: + multi_cpu = ' -m ' + str(cpu) + cpu_c = cpu + else: + multi_cpu = '' + cpu_c = '1' + + cmd = "mqaprna.py " + multi_cpu + " " + g + " -t " + method + " " + PATH + f + os.sep + args.subfolder + '/*.pdb -o ' + PATH + '' + f + '_' + method + print(cmd) + + #cmd2 = 'echo "' + cmd + '" | qsub -cwd -V -pe mpi ' + str(cpu_c) + ' -N _' + f + method_code #+ f + '_'+method # -l h_vmem=300M -l mem_free=500M + # print cmd2 + #RASP,SimRNA,AnalyzeGeometry,FARNA,QRNA,NAST_pyro,radiu + # s_of_gyration,SSAgreement,ClashScore,RNAkb + if args.run: + os.system(cmd) + diff --git a/rna_tools/tools/automatix/mqaprna_run copy.sh b/rna_tools/tools/automatix/mqaprna_run copy.sh new file mode 100644 index 000000000..c5e67505f --- /dev/null +++ b/rna_tools/tools/automatix/mqaprna_run copy.sh @@ -0,0 +1 @@ +/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -g FARNA_hires-_peyote.csv -m 4 -t FARNA_hires -o FARNA_hires 3f1hB/struc/3f1hB_M491.pdb 3f1hB/struc/3f1hB_M204.pdb 3f1hB/struc/3f1hB_M425.pdb 3f1hB/struc/3f1hB_M404.pdb 3f1hB/struc/3f1hB_M330.pdb 3f1hB/struc/3f1hB_M57.pdb 3f1hB/struc/3f1hB_M337.pdb 3f1hB/struc/3f1hB_M217.pdb 3f1hB/struc/3f1hB_M213.pdb 3f1hB/struc/3f1hB_M190.pdb 3f1hB/struc/3f1hB_M141.pdb 3f1hB/struc/3f1hB_M380.pdb 3f1hB/struc/3f1hB_M143.pdb 3f1hB/struc/3f1hB_M465.pdb 3f1hB/struc/3f1hB_M48.pdb 3f1hB/struc/3f1hB_M78.pdb 3f1hB/struc/3f1hB_M500.pdb 3f1hB/struc/3f1hB_M450.pdb 3f1hB/struc/3f1hB_M384.pdb 3f1hB/struc/3f1hB_M16.pdb 3f1hB/struc/3f1hB_M403.pdb 3f1hB/struc/3f1hB_M198.pdb 3f1hB/struc/3f1hB_M87.pdb 3f1hB/struc/3f1hB_M287.pdb 3f1hB/struc/3f1hB_M463.pdb 3f1hB/struc/3f1hB_M256.pdb 3f1hB/struc/3f1hB_M193.pdb 3f1hB/struc/3f1hB_M372.pdb 3f1hB/struc/3f1hB_M304.pdb 3f1hB/struc/3f1hB_M441.pdb 3f1hB/struc/3f1hB_M260.pdb 3f1hB/struc/3f1hB_M432.pdb 3f1hB/struc/3f1hB_M180.pdb 3f1hB/struc/3f1hB_M107.pdb 3f1hB/struc/3f1hB_M378.pdb 3f1hB/struc/3f1hB_M274.pdb 3f1hB/struc/3f1hB_M479.pdb 3f1hB/struc/3f1hB_M70.pdb 3f1hB/struc/3f1hB_M438.pdb 3f1hB/struc/3f1hB_M245.pdb 3f1hB/struc/3f1hB_M448.pdb 3f1hB/struc/3f1hB_M54.pdb 3f1hB/struc/3f1hB_M409.pdb 3f1hB/struc/3f1hB_M12.pdb 3f1hB/struc/3f1hB_M151.pdb 3f1hB/struc/3f1hB_M110.pdb 3f1hB/struc/3f1hB_M185.pdb 3f1hB/struc/3f1hB_M257.pdb 3f1hB/struc/3f1hB_M435.pdb 3f1hB/struc/3f1hB_M246.pdb 3f1hB/struc/3f1hB_M219.pdb 3f1hB/struc/3f1hB_M81.pdb 3f1hB/struc/3f1hB_M208.pdb 3f1hB/struc/3f1hB_M389.pdb 3f1hB/struc/3f1hB_M363.pdb 3f1hB/struc/3f1hB_M440.pdb 3f1hB/struc/3f1hB_M117.pdb 3f1hB/struc/3f1hB_M444.pdb 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2anrB/struc/2anrB_M54.pdb 2anrB/struc/2anrB_M205.pdb 1njp5/struc/1njp5_M98.pdb 1njp5/struc/1njp5_M74.pdb 1njp5/struc/1njp5_M128.pdb 1njp5/struc/1njp5_M2.pdb 1njp5/struc/1njp5_M354.pdb 1njp5/struc/1njp5_M454.pdb 1njp5/struc/1njp5_M319.pdb 1njp5/struc/1njp5_M51.pdb 1njp5/struc/1njp5_M135.pdb 1njp5/struc/1njp5_M262.pdb 1njp5/struc/1njp5_M473.pdb 1njp5/struc/1njp5_M333.pdb 1njp5/struc/1njp5_M122.pdb 1njp5/struc/1njp5_M176.pdb 1njp5/struc/1njp5_M219.pdb 1njp5/struc/1njp5_M116.pdb 1njp5/struc/1njp5_M165.pdb 1njp5/struc/1njp5_M480.pdb 1njp5/struc/1njp5_M390.pdb 1njp5/struc/1njp5_M28.pdb 1njp5/struc/1njp5_M404.pdb 1njp5/struc/1njp5_M273.pdb 1njp5/struc/1njp5_M321.pdb 1njp5/struc/1njp5_M223.pdb 1njp5/struc/1njp5_M443.pdb 1njp5/struc/1njp5_M34.pdb 1njp5/struc/1njp5_M500.pdb 1njp5/struc/1njp5_M465.pdb 1njp5/struc/1njp5_M355.pdb 1njp5/struc/1njp5_M164.pdb 1njp5/struc/1njp5_M111.pdb 1njp5/struc/1njp5_M166.pdb 1njp5/struc/1njp5_M499.pdb 1njp5/struc/1njp5_M10.pdb 1njp5/struc/1njp5_M57.pdb 1njp5/struc/1njp5_M153.pdb 1njp5/struc/1njp5_M313.pdb 1njp5/struc/1njp5_M474.pdb 1njp5/struc/1njp5_M144.pdb 1njp5/struc/1njp5_M11.pdb 1njp5/struc/1njp5_M351.pdb 1njp5/struc/1njp5_M199.pdb 1njp5/struc/1njp5_M216.pdb 1njp5/struc/1njp5_M331.pdb 1njp5/struc/1njp5_M103.pdb 1njp5/struc/1njp5_M346.pdb 1njp5/struc/1njp5_M315.pdb 1njp5/struc/1njp5_M407.pdb 1njp5/struc/1njp5_M7.pdb 1njp5/struc/1njp5_M246.pdb 1njp5/struc/1njp5_M193.pdb 1njp5/struc/1njp5_M85.pdb 1njp5/struc/1njp5_M438.pdb 1njp5/struc/1njp5_M432.pdb 1njp5/struc/1njp5_M27.pdb 1njp5/struc/1njp5_M334.pdb 1njp5/struc/1njp5_M403.pdb 1njp5/struc/1njp5_M269.pdb 1njp5/struc/1njp5_M89.pdb 1njp5/struc/1njp5_M217.pdb 1njp5/struc/1njp5_M173.pdb 1njp5/struc/1njp5_M425.pdb 1njp5/struc/1njp5_M279.pdb 1njp5/struc/1njp5_M268.pdb 1njp5/struc/1njp5_M102.pdb 1njp5/struc/1njp5_M374.pdb 1njp5/struc/1njp5_M304.pdb 1njp5/struc/1njp5_M368.pdb 1njp5/struc/1njp5_M127.pdb 1njp5/struc/1njp5_M385.pdb 1njp5/struc/1njp5_M46.pdb 1njp5/struc/1njp5_M218.pdb 1njp5/struc/1njp5_M31.pdb 1njp5/struc/1njp5_M257.pdb 1njp5/struc/1njp5_M3.pdb 1njp5/struc/1njp5_M431.pdb 1njp5/struc/1njp5_M13.pdb 1njp5/struc/1njp5_M263.pdb 1njp5/struc/1njp5_M340.pdb 1njp5/struc/1njp5_M301.pdb 1njp5/struc/1njp5_M72.pdb 1njp5/struc/1njp5_M280.pdb 1njp5/struc/1njp5_M358.pdb 1njp5/struc/1njp5_M18.pdb 1njp5/struc/1njp5_M240.pdb 1njp5/struc/1njp5_M220.pdb 1njp5/struc/1njp5_M215.pdb 1njp5/struc/1njp5_M69.pdb 1njp5/struc/1njp5_M130.pdb 1njp5/struc/1njp5_M423.pdb 1njp5/struc/1njp5_M175.pdb 1njp5/struc/1njp5_M33.pdb 1njp5/struc/1njp5_M405.pdb 1njp5/struc/1njp5_M233.pdb 1njp5/struc/1njp5_M21.pdb 1njp5/struc/1njp5_M308.pdb 1njp5/struc/1njp5_M62.pdb 1njp5/struc/1njp5_M453.pdb 1njp5/struc/1njp5_M286.pdb 1njp5/struc/1njp5_M434.pdb 1njp5/struc/1njp5_M371.pdb 1njp5/struc/1njp5_M124.pdb 1njp5/struc/1njp5_M44.pdb 1njp5/struc/1njp5_M36.pdb 1njp5/struc/1njp5_M409.pdb 1njp5/struc/1njp5_M270.pdb 1njp5/struc/1njp5_M81.pdb 1njp5/struc/1njp5_M260.pdb 1njp5/struc/1njp5_M187.pdb 1njp5/struc/1njp5_M4.pdb 1njp5/struc/1njp5_M185.pdb 1njp5/struc/1njp5_M162.pdb 1njp5/struc/1njp5_M464.pdb 1njp5/struc/1njp5_M370.pdb 1njp5/struc/1njp5_M64.pdb 1njp5/struc/1njp5_M458.pdb 1njp5/struc/1njp5_M55.pdb 1njp5/struc/1njp5_M35.pdb 1njp5/struc/1njp5_M22.pdb 1njp5/struc/1njp5_M281.pdb 1njp5/struc/1njp5_M421.pdb 1njp5/struc/1njp5_M288.pdb 1njp5/struc/1njp5_M427.pdb 1njp5/struc/1njp5_M6.pdb 1njp5/struc/1njp5_M364.pdb 1njp5/struc/1njp5_M299.pdb 1njp5/struc/1njp5_M398.pdb 1njp5/struc/1njp5_M112.pdb 1njp5/struc/1njp5_M24.pdb 1njp5/struc/1njp5_M121.pdb 1njp5/struc/1njp5_M440.pdb 1njp5/struc/1njp5_M491.pdb 1njp5/struc/1njp5_M9.pdb 1njp5/struc/1njp5_M157.pdb 1njp5/struc/1njp5_M325.pdb 1njp5/struc/1njp5_M401.pdb 1njp5/struc/1njp5_M151.pdb 1njp5/struc/1njp5_M352.pdb 1njp5/struc/1njp5_M61.pdb 1njp5/struc/1njp5_M232.pdb 1njp5/struc/1njp5_M136.pdb 1njp5/struc/1njp5_M460.pdb 1njp5/struc/1njp5_M77.pdb 1njp5/struc/1njp5_M252.pdb 1njp5/struc/1njp5_M360.pdb 1njp5/struc/1njp5_M462.pdb 1njp5/struc/1njp5_M411.pdb 1njp5/struc/1njp5_M181.pdb 1njp5/struc/1njp5_M347.pdb 1njp5/struc/1njp5_M413.pdb 1njp5/struc/1njp5_M487.pdb 1njp5/struc/1njp5_M376.pdb 1njp5/struc/1njp5_M439.pdb 1njp5/struc/1njp5_M489.pdb 1njp5/struc/1njp5_M245.pdb 1njp5/struc/1njp5_M101.pdb 1njp5/struc/1njp5_M382.pdb 1njp5/struc/1njp5_M475.pdb 1njp5/struc/1njp5_M498.pdb 1njp5/struc/1njp5_M129.pdb 1njp5/struc/1njp5_M393.pdb 1mfqA/struc/1mfqA_M109.pdb 1mfqA/struc/1mfqA_M136.pdb 1mfqA/struc/1mfqA_M294.pdb 1mfqA/struc/1mfqA_M256.pdb 1mfqA/struc/1mfqA_M147.pdb 1mfqA/struc/1mfqA_M238.pdb 1mfqA/struc/1mfqA_M85.pdb 1mfqA/struc/1mfqA_M26.pdb 1mfqA/struc/1mfqA_M326.pdb 1mfqA/struc/1mfqA_M337.pdb 1mfqA/struc/1mfqA_M481.pdb 1mfqA/struc/1mfqA_M453.pdb 2bh2D/struc/2bh2D_M325.pdb 2bh2D/struc/2bh2D_M210.pdb 2bh2D/struc/2bh2D_M139.pdb 2bh2D/struc/2bh2D_M47.pdb 2bh2D/struc/2bh2D_M329.pdb 2bh2D/struc/2bh2D_M500.pdb 2bh2D/struc/2bh2D_M402.pdb 2bh2D/struc/2bh2D_M493.pdb 2bh2D/struc/2bh2D_M86.pdb 2bh2D/struc/2bh2D_M202.pdb 2bh2D/struc/2bh2D_M480.pdb 2bh2D/struc/2bh2D_M447.pdb 2bh2D/struc/2bh2D_M454.pdb 2bh2D/struc/2bh2D_M465.pdb 2bh2D/struc/2bh2D_M439.pdb 2bh2D/struc/2bh2D_M357.pdb 2bh2D/struc/2bh2D_M236.pdb 2bh2D/struc/2bh2D_M165.pdb 2bh2D/struc/2bh2D_M331.pdb 2bh2D/struc/2bh2D_M50.pdb 2bh2D/struc/2bh2D_M473.pdb 2bh2D/struc/2bh2D_M51.pdb 2bh2D/struc/2bh2D_M306.pdb 2bh2D/struc/2bh2D_M406.pdb 2bh2D/struc/2bh2D_M438.pdb 2bh2D/struc/2bh2D_M65.pdb 2bh2D/struc/2bh2D_M18.pdb 2bh2D/struc/2bh2D_M267.pdb 2bh2D/struc/2bh2D_M92.pdb 2bh2D/struc/2bh2D_M125.pdb 2bh2D/struc/2bh2D_M159.pdb 2bh2D/struc/2bh2D_M294.pdb 2bh2D/struc/2bh2D_M374.pdb 2bh2D/struc/2bh2D_M196.pdb 2bh2D/struc/2bh2D_M155.pdb 2bh2D/struc/2bh2D_M41.pdb 2bh2D/struc/2bh2D_M182.pdb 2bh2D/struc/2bh2D_M348.pdb 2bh2D/struc/2bh2D_M477.pdb 2bh2D/struc/2bh2D_M411.pdb 2bh2D/struc/2bh2D_M293.pdb 2bh2D/struc/2bh2D_M376.pdb 2bh2D/struc/2bh2D_M5.pdb 2bh2D/struc/2bh2D_M207.pdb 2bh2D/struc/2bh2D_M244.pdb 2bh2D/struc/2bh2D_M310.pdb 2bh2D/struc/2bh2D_M186.pdb 2bh2D/struc/2bh2D_M273.pdb 2bh2D/struc/2bh2D_M225.pdb 2bh2D/struc/2bh2D_M302.pdb 2bh2D/struc/2bh2D_M233.pdb 2bh2D/struc/2bh2D_M372.pdb 2bh2D/struc/2bh2D_M282.pdb 2bh2D/struc/2bh2D_M26.pdb 2bh2D/struc/2bh2D_M71.pdb 2bh2D/struc/2bh2D_M478.pdb 2bh2D/struc/2bh2D_M393.pdb 2bh2D/struc/2bh2D_M79.pdb 2bh2D/struc/2bh2D_M7.pdb 2bh2D/struc/2bh2D_M452.pdb 2bh2D/struc/2bh2D_M362.pdb 2bh2D/struc/2bh2D_M102.pdb 2bh2D/struc/2bh2D_M171.pdb 2bh2D/struc/2bh2D_M63.pdb 2bh2D/struc/2bh2D_M390.pdb 2bh2D/struc/2bh2D_M491.pdb 2bh2D/struc/2bh2D_M420.pdb 2bh2D/struc/2bh2D_M463.pdb 2bh2D/struc/2bh2D_M460.pdb 2bh2D/struc/2bh2D_M55.pdb 2bh2D/struc/2bh2D_M285.pdb 2bh2D/struc/2bh2D_M116.pdb 2bh2D/struc/2bh2D_M163.pdb 2bh2D/struc/2bh2D_M400.pdb 2bh2D/struc/2bh2D_M335.pdb 2bh2D/struc/2bh2D_M333.pdb 2bh2D/struc/2bh2D_M89.pdb 2bh2D/struc/2bh2D_M490.pdb 2bh2D/struc/2bh2D_M132.pdb 2bh2D/struc/2bh2D_M278.pdb 2bh2D/struc/2bh2D_M489.pdb 2bh2D/struc/2bh2D_M35.pdb 2bh2D/struc/2bh2D_M268.pdb 2bh2D/struc/2bh2D_M20.pdb 2bh2D/struc/2bh2D_M361.pdb 2bh2D/struc/2bh2D_M8.pdb 2bh2D/struc/2bh2D_M119.pdb 2bh2D/struc/2bh2D_M482.pdb 2bh2D/struc/2bh2D_M269.pdb 2bh2D/struc/2bh2D_M428.pdb 2bh2D/struc/2bh2D_M138.pdb 2bh2D/struc/2bh2D_M265.pdb 2bh2D/struc/2bh2D_M347.pdb 2bh2D/struc/2bh2D_M45.pdb 2bh2D/struc/2bh2D_M421.pdb 2bh2D/struc/2bh2D_M15.pdb 2bh2D/struc/2bh2D_M468.pdb 2bh2D/struc/2bh2D_M105.pdb 2bh2D/struc/2bh2D_M425.pdb 2bh2D/struc/2bh2D_M97.pdb 2bh2D/struc/2bh2D_M75.pdb 2bh2D/struc/2bh2D_M219.pdb 2bh2D/struc/2bh2D_M368.pdb 2bh2D/struc/2bh2D_M17.pdb 2bh2D/struc/2bh2D_M322.pdb 2bh2D/struc/2bh2D_M204.pdb 2bh2D/struc/2bh2D_M156.pdb 2bh2D/struc/2bh2D_M100.pdb 2bh2D/struc/2bh2D_M261.pdb 2bh2D/struc/2bh2D_M375.pdb 2bh2D/struc/2bh2D_M435.pdb 2bh2D/struc/2bh2D_M399.pdb 2bh2D/struc/2bh2D_M137.pdb 2bh2D/struc/2bh2D_M461.pdb 2bh2D/struc/2bh2D_M341.pdb 2bh2D/struc/2bh2D_M458.pdb 2bh2D/struc/2bh2D_M318.pdb 2bh2D/struc/2bh2D_M436.pdb 2bh2D/struc/2bh2D_M433.pdb 2bh2D/struc/2bh2D_M237.pdb 2bh2D/struc/2bh2D_M427.pdb 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3f30X/struc/3f30X_M237.pdb 3f30X/struc/3f30X_M152.pdb 3f30X/struc/3f30X_M46.pdb 3f30X/struc/3f30X_M320.pdb 3f30X/struc/3f30X_M124.pdb 3f30X/struc/3f30X_M150.pdb 3f30X/struc/3f30X_M103.pdb 3f30X/struc/3f30X_M61.pdb 3f30X/struc/3f30X_M164.pdb 3f30X/struc/3f30X_M333.pdb 3f30X/struc/3f30X_M266.pdb 3f30X/struc/3f30X_M371.pdb 3f30X/struc/3f30X_M254.pdb 3f30X/struc/3f30X_M154.pdb 3f30X/struc/3f30X_M70.pdb 3f30X/struc/3f30X_M432.pdb 3f30X/struc/3f30X_M244.pdb 3f30X/struc/3f30X_M275.pdb 3f30X/struc/3f30X_M65.pdb 3f30X/struc/3f30X_M390.pdb 3f30X/struc/3f30X_M489.pdb 3f30X/struc/3f30X_M157.pdb 3f30X/struc/3f30X_M204.pdb 3f30X/struc/3f30X_M246.pdb 3f30X/struc/3f30X_M109.pdb 3f30X/struc/3f30X_M414.pdb 3f30X/struc/3f30X_M370.pdb 3f30X/struc/3f30X_M217.pdb 3f30X/struc/3f30X_M141.pdb 3f30X/struc/3f30X_M11.pdb 3f30X/struc/3f30X_M222.pdb 3f30X/struc/3f30X_M91.pdb 3f30X/struc/3f30X_M241.pdb 3f30X/struc/3f30X_M363.pdb 3f30X/struc/3f30X_M116.pdb 3f30X/struc/3f30X_M28.pdb 3f30X/struc/3f30X_M226.pdb 3f30X/struc/3f30X_M478.pdb 3f30X/struc/3f30X_M373.pdb 3f30X/struc/3f30X_M293.pdb 3f30X/struc/3f30X_M211.pdb 3f30X/struc/3f30X_M367.pdb 3f30X/struc/3f30X_M377.pdb 3f30X/struc/3f30X_M297.pdb 3f30X/struc/3f30X_M408.pdb 3f30X/struc/3f30X_M180.pdb 3f30X/struc/3f30X_M175.pdb 3f30X/struc/3f30X_M487.pdb 3f30X/struc/3f30X_M234.pdb 3f30X/struc/3f30X_M21.pdb 3f30X/struc/3f30X_M63.pdb 3f30X/struc/3f30X_M58.pdb 3f30X/struc/3f30X_M100.pdb 3f30X/struc/3f30X_M459.pdb 3f30X/struc/3f30X_M258.pdb 3f30X/struc/3f30X_M272.pdb 3f30X/struc/3f30X_M475.pdb 3f30X/struc/3f30X_M99.pdb 3f30X/struc/3f30X_M279.pdb 3f30X/struc/3f30X_M401.pdb 3f30X/struc/3f30X_M37.pdb 3f30X/struc/3f30X_M132.pdb 3f30X/struc/3f30X_M409.pdb 3f30X/struc/3f30X_M15.pdb 3f30X/struc/3f30X_M433.pdb 3f30X/struc/3f30X_M205.pdb 3f30X/struc/3f30X_M354.pdb 3f30X/struc/3f30X_M298.pdb 3f30X/struc/3f30X_M375.pdb 3f30X/struc/3f30X_M255.pdb 3f30X/struc/3f30X_M334.pdb 3f30X/struc/3f30X_M182.pdb 3f30X/struc/3f30X_M318.pdb 3f30X/struc/3f30X_M146.pdb 3f30X/struc/3f30X_M156.pdb 3f30X/struc/3f30X_M74.pdb 3f30X/struc/3f30X_M316.pdb 3f30X/struc/3f30X_M199.pdb 3f30X/struc/3f30X_M338.pdb 3f30X/struc/3f30X_M465.pdb 3f30X/struc/3f30X_M49.pdb 3f30X/struc/3f30X_M40.pdb 3f30X/struc/3f30X_M479.pdb 3f30X/struc/3f30X_M151.pdb 3f30X/struc/3f30X_M64.pdb 3f30X/struc/3f30X_M3.pdb 3f30X/struc/3f30X_M17.pdb 3f30X/struc/3f30X_M477.pdb 3f30X/struc/3f30X_M206.pdb 3f30X/struc/3f30X_M403.pdb 3f30X/struc/3f30X_M281.pdb 3f30X/struc/3f30X_M59.pdb 3f30X/struc/3f30X_M421.pdb 3f30X/struc/3f30X_M26.pdb 3f30X/struc/3f30X_M236.pdb 3f30X/struc/3f30X_M347.pdb 3f30X/struc/3f30X_M340.pdb 3f30X/struc/3f30X_M336.pdb 3f30X/struc/3f30X_M115.pdb 3f30X/struc/3f30X_M493.pdb 3f30X/struc/3f30X_M242.pdb 3f30X/struc/3f30X_M167.pdb 3f30X/struc/3f30X_M44.pdb 3f30X/struc/3f30X_M200.pdb 3f30X/struc/3f30X_M104.pdb 3f30X/struc/3f30X_M417.pdb 3f30X/struc/3f30X_M490.pdb 3f30X/struc/3f30X_M71.pdb 3f30X/struc/3f30X_M420.pdb 3f30X/struc/3f30X_M193.pdb 3f30X/struc/3f30X_M480.pdb 3f30X/struc/3f30X_M16.pdb 3f30X/struc/3f30X_M220.pdb 3f30X/struc/3f30X_M94.pdb 3f30X/struc/3f30X_M51.pdb 3f30X/struc/3f30X_M383.pdb 3f30X/struc/3f30X_M441.pdb 3f30X/struc/3f30X_M148.pdb 3f30X/struc/3f30X_M444.pdb 3f30X/struc/3f30X_M344.pdb 3f30X/struc/3f30X_M358.pdb 3f30X/struc/3f30X_M238.pdb 3f30X/struc/3f30X_M52.pdb 3f30X/struc/3f30X_M209.pdb 3f30X/struc/3f30X_M87.pdb 3f30X/struc/3f30X_M197.pdb 3f30X/struc/3f30X_M170.pdb 3f30X/struc/3f30X_M308.pdb 3f30X/struc/3f30X_M55.pdb 3f30X/struc/3f30X_M446.pdb 3f30X/struc/3f30X_M256.pdb 3f30X/struc/3f30X_M201.pdb 3f30X/struc/3f30X_M461.pdb 3f30X/struc/3f30X_M430.pdb 3f30X/struc/3f30X_M102.pdb 3f30X/struc/3f30X_M482.pdb 3f30X/struc/3f30X_M346.pdb 3f30X/struc/3f30X_M176.pdb 3f30X/struc/3f30X_M240.pdb 3f30X/struc/3f30X_M419.pdb 3f30X/struc/3f30X_M107.pdb 3f30X/struc/3f30X_M355.pdb 3f30X/struc/3f30X_M285.pdb 3f30X/struc/3f30X_M353.pdb 3f30X/struc/3f30X_M208.pdb 3f30X/struc/3f30X_M2.pdb 3f30X/struc/3f30X_M423.pdb 3f30X/struc/3f30X_M496.pdb 3f30X/struc/3f30X_M337.pdb 3f30X/struc/3f30X_M447.pdb 3f30X/struc/3f30X_M470.pdb 3f30X/struc/3f30X_M312.pdb 3f30X/struc/3f30X_M491.pdb 3f30X/struc/3f30X_M418.pdb 3f30X/struc/3f30X_M202.pdb 3f30X/struc/3f30X_M349.pdb 3f30X/struc/3f30X_M300.pdb 3f30X/struc/3f30X_M57.pdb 3f30X/struc/3f30X_M315.pdb 3f30X/struc/3f30X_M125.pdb 3f30X/struc/3f30X_M145.pdb 3f30X/struc/3f30X_M292.pdb 3f30X/struc/3f30X_M488.pdb 3f30X/struc/3f30X_M50.pdb 3f30X/struc/3f30X_M39.pdb 3f30X/struc/3f30X_M426.pdb 3f30X/struc/3f30X_M225.pdb 3f30X/struc/3f30X_M174.pdb 3f30X/struc/3f30X_M379.pdb 3f30X/struc/3f30X_M191.pdb 3f30X/struc/3f30X_M393.pdb 3f30X/struc/3f30X_M388.pdb 3f30X/struc/3f30X_M286.pdb 3f30X/struc/3f30X_M435.pdb 3f30X/struc/3f30X_M434.pdb 3f30X/struc/3f30X_M139.pdb 3f30X/struc/3f30X_M130.pdb 3f30X/struc/3f30X_M5.pdb 3f30X/struc/3f30X_M98.pdb 3f30X/struc/3f30X_M399.pdb 3f30X/struc/3f30X_M81.pdb 3f30X/struc/3f30X_M369.pdb 3f30X/struc/3f30X_M168.pdb 3f30X/struc/3f30X_M131.pdb 3f30X/struc/3f30X_M29.pdb 3f30X/struc/3f30X_M77.pdb 3f30X/struc/3f30X_M229.pdb 3f30X/struc/3f30X_M25.pdb 3f30X/struc/3f30X_M122.pdb 3f30X/struc/3f30X_M114.pdb 3f30X/struc/3f30X_M296.pdb 3f30X/struc/3f30X_M330.pdb 3f30X/struc/3f30X_M69.pdb 3f30X/struc/3f30X_M171.pdb 3f30X/struc/3f30X_M304.pdb 3f30X/struc/3f30X_M88.pdb 3f30X/struc/3f30X_M19.pdb 3f30X/struc/3f30X_M456.pdb 3f30X/struc/3f30X_M96.pdb 3f30X/struc/3f30X_M436.pdb 3f30X/struc/3f30X_M449.pdb 3f30X/struc/3f30X_M219.pdb 3f30X/struc/3f30X_M348.pdb 3f30X/struc/3f30X_M262.pdb 3f30X/struc/3f30X_M22.pdb 3f30X/struc/3f30X_M6.pdb 3f30X/struc/3f30X_M257.pdb 3f30X/struc/3f30X_M437.pdb 3f30X/struc/3f30X_M492.pdb 3f30X/struc/3f30X_M422.pdb 3f30X/struc/3f30X_M192.pdb 3f30X/struc/3f30X_M327.pdb 3f30X/struc/3f30X_M233.pdb 3f30X/struc/3f30X_M137.pdb 3f30X/struc/3f30X_M267.pdb 3f30X/struc/3f30X_M249.pdb 3f30X/struc/3f30X_M288.pdb 3f30X/struc/3f30X_M24.pdb 3f30X/struc/3f30X_M67.pdb 3f30X/struc/3f30X_M68.pdb 3f30X/struc/3f30X_M110.pdb 3f30X/struc/3f30X_M12.pdb 3f30X/struc/3f30X_M198.pdb 3f30X/struc/3f30X_M458.pdb 3f30X/struc/3f30X_M325.pdb 3f30X/struc/3f30X_M20.pdb 3f30X/struc/3f30X_M10.pdb 3f30X/struc/3f30X_M269.pdb 3f30X/struc/3f30X_M250.pdb 3f30X/struc/3f30X_M142.pdb 3f30X/struc/3f30X_M82.pdb 3f30X/struc/3f30X_M321.pdb 3f30X/struc/3f30X_M499.pdb 3f30X/struc/3f30X_M273.pdb 3f30X/struc/3f30X_M118.pdb 3f30X/struc/3f30X_M207.pdb 3f30X/struc/3f30X_M278.pdb 3f30X/struc/3f30X_M360.pdb 3f30X/struc/3f30X_M471.pdb 3f30X/struc/3f30X_M169.pdb 3f30X/struc/3f30X_M13.pdb 3f30X/struc/3f30X_M450.pdb 3f30X/struc/3f30X_M78.pdb 3f30X/struc/3f30X_M38.pdb 3f30X/struc/3f30X_M245.pdb 3f30X/struc/3f30X_M143.pdb 3f30X/struc/3f30X_M464.pdb 3f30X/struc/3f30X_M32.pdb 3f30X/struc/3f30X_M271.pdb 3f30X/struc/3f30X_M396.pdb 3f30X/struc/3f30X_M440.pdb 3f30X/struc/3f30X_M368.pdb 3f30X/struc/3f30X_M319.pdb 3f30X/struc/3f30X_M289.pdb 3f30X/struc/3f30X_M455.pdb 3f30X/struc/3f30X_M79.pdb 3f30X/struc/3f30X_M165.pdb 3f30X/struc/3f30X_M121.pdb 3f30X/struc/3f30X_M385.pdb 3f30X/struc/3f30X_M173.pdb 3f30X/struc/3f30X_M452.pdb 3f30X/struc/3f30X_M144.pdb 3f30X/struc/3f30X_M253.pdb 3f30X/struc/3f30X_M90.pdb 3f30X/struc/3f30X_M387.pdb 3f30X/struc/3f30X_M36.pdb 3f30X/struc/3f30X_M391.pdb 3f30X/struc/3f30X_M283.pdb 3f30X/struc/3f30X_M264.pdb 3f30X/struc/3f30X_M407.pdb 3f30X/struc/3f30X_M472.pdb 3f30X/struc/3f30X_M160.pdb 3f30X/struc/3f30X_M287.pdb 3f30X/struc/3f30X_M27.pdb 3f30X/struc/3f30X_M41.pdb 3f30X/struc/3f30X_M301.pdb 3f30X/struc/3f30X_M215.pdb 3f30X/struc/3f30X_M339.pdb 3f30X/struc/3f30X_M463.pdb 3f30X/struc/3f30X_M95.pdb 3f30X/struc/3f30X_M352.pdb 3f30X/struc/3f30X_M366.pdb 3f30X/struc/3f30X_M213.pdb 3f30X/struc/3f30X_M495.pdb 3f30X/struc/3f30X_M239.pdb 3f30X/struc/3f30X_M500.pdb 3f30X/struc/3f30X_M309.pdb 3f30X/struc/3f30X_M214.pdb 3f30X/struc/3f30X_M187.pdb 1msyA/struc/1msyA_M485.pdb 1msyA/struc/1msyA_M110.pdb 1msyA/struc/1msyA_M37.pdb 1msyA/struc/1msyA_M73.pdb 1msyA/struc/1msyA_M111.pdb 1msyA/struc/1msyA_M127.pdb 1msyA/struc/1msyA_M134.pdb 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2nz4S/struc/2nz4S_M326.pdb 2nz4S/struc/2nz4S_M327.pdb 2nz4S/struc/2nz4S_M328.pdb 2nz4S/struc/2nz4S_M33.pdb 2nz4S/struc/2nz4S_M330.pdb 2nz4S/struc/2nz4S_M331.pdb 2nz4S/struc/2nz4S_M333.pdb 2nz4S/struc/2nz4S_M334.pdb 2nz4S/struc/2nz4S_M335.pdb 2nz4S/struc/2nz4S_M336.pdb 2nz4S/struc/2nz4S_M337.pdb 2nz4S/struc/2nz4S_M339.pdb 2nz4S/struc/2nz4S_M34.pdb 2nz4S/struc/2nz4S_M342.pdb 2nz4S/struc/2nz4S_M343.pdb 2nz4S/struc/2nz4S_M344.pdb 2nz4S/struc/2nz4S_M345.pdb 2nz4S/struc/2nz4S_M346.pdb 2nz4S/struc/2nz4S_M347.pdb 2nz4S/struc/2nz4S_M348.pdb 2nz4S/struc/2nz4S_M349.pdb 2nz4S/struc/2nz4S_M35.pdb 2nz4S/struc/2nz4S_M352.pdb 2nz4S/struc/2nz4S_M353.pdb 2nz4S/struc/2nz4S_M354.pdb 2nz4S/struc/2nz4S_M355.pdb 2nz4S/struc/2nz4S_M356.pdb 2nz4S/struc/2nz4S_M357.pdb 2nz4S/struc/2nz4S_M358.pdb 2nz4S/struc/2nz4S_M359.pdb 2nz4S/struc/2nz4S_M36.pdb 2nz4S/struc/2nz4S_M360.pdb 2nz4S/struc/2nz4S_M364.pdb 2nz4S/struc/2nz4S_M365.pdb 2nz4S/struc/2nz4S_M366.pdb 2nz4S/struc/2nz4S_M367.pdb 2nz4S/struc/2nz4S_M368.pdb 2nz4S/struc/2nz4S_M369.pdb 2nz4S/struc/2nz4S_M370.pdb 2nz4S/struc/2nz4S_M371.pdb 2nz4S/struc/2nz4S_M373.pdb 2nz4S/struc/2nz4S_M375.pdb 2nz4S/struc/2nz4S_M376.pdb 2nz4S/struc/2nz4S_M377.pdb 2nz4S/struc/2nz4S_M379.pdb 2nz4S/struc/2nz4S_M38.pdb 2nz4S/struc/2nz4S_M380.pdb 2nz4S/struc/2nz4S_M381.pdb 2nz4S/struc/2nz4S_M382.pdb 2nz4S/struc/2nz4S_M383.pdb 2nz4S/struc/2nz4S_M385.pdb 2nz4S/struc/2nz4S_M386.pdb 2nz4S/struc/2nz4S_M388.pdb 2nz4S/struc/2nz4S_M389.pdb 2nz4S/struc/2nz4S_M39.pdb 2nz4S/struc/2nz4S_M390.pdb 2nz4S/struc/2nz4S_M393.pdb 2nz4S/struc/2nz4S_M394.pdb 2nz4S/struc/2nz4S_M395.pdb 2nz4S/struc/2nz4S_M396.pdb 2nz4S/struc/2nz4S_M397.pdb 2nz4S/struc/2nz4S_M398.pdb 2nz4S/struc/2nz4S_M4.pdb 2nz4S/struc/2nz4S_M400.pdb 2nz4S/struc/2nz4S_M401.pdb 2nz4S/struc/2nz4S_M402.pdb 2nz4S/struc/2nz4S_M404.pdb 2nz4S/struc/2nz4S_M405.pdb 2nz4S/struc/2nz4S_M406.pdb 2nz4S/struc/2nz4S_M407.pdb 2nz4S/struc/2nz4S_M408.pdb 2nz4S/struc/2nz4S_M409.pdb 2nz4S/struc/2nz4S_M41.pdb 2nz4S/struc/2nz4S_M410.pdb 2nz4S/struc/2nz4S_M413.pdb 2nz4S/struc/2nz4S_M414.pdb 2nz4S/struc/2nz4S_M415.pdb 2nz4S/struc/2nz4S_M416.pdb 2nz4S/struc/2nz4S_M420.pdb 2nz4S/struc/2nz4S_M421.pdb 2nz4S/struc/2nz4S_M423.pdb 2nz4S/struc/2nz4S_M425.pdb 2nz4S/struc/2nz4S_M426.pdb 2nz4S/struc/2nz4S_M427.pdb 2nz4S/struc/2nz4S_M430.pdb 2nz4S/struc/2nz4S_M431.pdb 2nz4S/struc/2nz4S_M432.pdb 2nz4S/struc/2nz4S_M433.pdb 2nz4S/struc/2nz4S_M434.pdb 2nz4S/struc/2nz4S_M436.pdb 2nz4S/struc/2nz4S_M438.pdb 2nz4S/struc/2nz4S_M439.pdb 2nz4S/struc/2nz4S_M44.pdb 2nz4S/struc/2nz4S_M440.pdb 2nz4S/struc/2nz4S_M441.pdb 2nz4S/struc/2nz4S_M442.pdb 2nz4S/struc/2nz4S_M443.pdb 2nz4S/struc/2nz4S_M445.pdb 2nz4S/struc/2nz4S_M449.pdb 2nz4S/struc/2nz4S_M45.pdb 2nz4S/struc/2nz4S_M451.pdb 2nz4S/struc/2nz4S_M452.pdb 2nz4S/struc/2nz4S_M453.pdb 2nz4S/struc/2nz4S_M456.pdb 2nz4S/struc/2nz4S_M457.pdb 2nz4S/struc/2nz4S_M459.pdb 2nz4S/struc/2nz4S_M460.pdb 2nz4S/struc/2nz4S_M461.pdb 2nz4S/struc/2nz4S_M463.pdb 2nz4S/struc/2nz4S_M464.pdb 2nz4S/struc/2nz4S_M465.pdb 2nz4S/struc/2nz4S_M466.pdb 2nz4S/struc/2nz4S_M467.pdb 2nz4S/struc/2nz4S_M468.pdb 2nz4S/struc/2nz4S_M47.pdb 2nz4S/struc/2nz4S_M471.pdb 2nz4S/struc/2nz4S_M472.pdb 2nz4S/struc/2nz4S_M473.pdb 2nz4S/struc/2nz4S_M474.pdb 2nz4S/struc/2nz4S_M475.pdb 2nz4S/struc/2nz4S_M476.pdb 2nz4S/struc/2nz4S_M477.pdb 2nz4S/struc/2nz4S_M478.pdb 2nz4S/struc/2nz4S_M48.pdb 2nz4S/struc/2nz4S_M480.pdb 2nz4S/struc/2nz4S_M481.pdb 2nz4S/struc/2nz4S_M482.pdb 2nz4S/struc/2nz4S_M483.pdb 2nz4S/struc/2nz4S_M484.pdb 2nz4S/struc/2nz4S_M485.pdb 2nz4S/struc/2nz4S_M486.pdb 2nz4S/struc/2nz4S_M488.pdb 2nz4S/struc/2nz4S_M489.pdb 2nz4S/struc/2nz4S_M49.pdb 2nz4S/struc/2nz4S_M490.pdb 2nz4S/struc/2nz4S_M491.pdb 2nz4S/struc/2nz4S_M492.pdb 2nz4S/struc/2nz4S_M493.pdb 2nz4S/struc/2nz4S_M495.pdb 2nz4S/struc/2nz4S_M496.pdb 2nz4S/struc/2nz4S_M497.pdb 2nz4S/struc/2nz4S_M499.pdb 2nz4S/struc/2nz4S_M5.pdb 2nz4S/struc/2nz4S_M50.pdb 2nz4S/struc/2nz4S_M500.pdb 2nz4S/struc/2nz4S_M51.pdb 2nz4S/struc/2nz4S_M53.pdb 2nz4S/struc/2nz4S_M55.pdb 2nz4S/struc/2nz4S_M58.pdb 2nz4S/struc/2nz4S_M60.pdb 2nz4S/struc/2nz4S_M61.pdb 2nz4S/struc/2nz4S_M63.pdb 2nz4S/struc/2nz4S_M67.pdb 2nz4S/struc/2nz4S_M68.pdb 2nz4S/struc/2nz4S_M69.pdb 2nz4S/struc/2nz4S_M7.pdb 2nz4S/struc/2nz4S_M70.pdb 2nz4S/struc/2nz4S_M72.pdb 2nz4S/struc/2nz4S_M73.pdb 2nz4S/struc/2nz4S_M74.pdb 2nz4S/struc/2nz4S_M75.pdb 2nz4S/struc/2nz4S_M79.pdb 2nz4S/struc/2nz4S_M8.pdb 2nz4S/struc/2nz4S_M80.pdb 2nz4S/struc/2nz4S_M81.pdb 2nz4S/struc/2nz4S_M83.pdb 2nz4S/struc/2nz4S_M84.pdb 2nz4S/struc/2nz4S_M85.pdb 2nz4S/struc/2nz4S_M86.pdb 2nz4S/struc/2nz4S_M87.pdb 2nz4S/struc/2nz4S_M89.pdb 2nz4S/struc/2nz4S_M90.pdb 2nz4S/struc/2nz4S_M91.pdb 2nz4S/struc/2nz4S_M92.pdb 2nz4S/struc/2nz4S_M93.pdb 2nz4S/struc/2nz4S_M94.pdb 2nz4S/struc/2nz4S_M96.pdb 2nz4S/struc/2nz4S_M97.pdb 2nz4S/struc/2nz4S_M98.pdb 2qbzX/struc/2qbzX_M1.pdb 2qbzX/struc/2qbzX_M10.pdb 2qbzX/struc/2qbzX_M100.pdb 2qbzX/struc/2qbzX_M101.pdb 2qbzX/struc/2qbzX_M102.pdb 2qbzX/struc/2qbzX_M103.pdb 2qbzX/struc/2qbzX_M104.pdb 2qbzX/struc/2qbzX_M105.pdb 2qbzX/struc/2qbzX_M106.pdb 2qbzX/struc/2qbzX_M107.pdb 2qbzX/struc/2qbzX_M108.pdb 2qbzX/struc/2qbzX_M109.pdb 2qbzX/struc/2qbzX_M11.pdb 2qbzX/struc/2qbzX_M110.pdb 2qbzX/struc/2qbzX_M111.pdb 2qbzX/struc/2qbzX_M112.pdb 2qbzX/struc/2qbzX_M113.pdb 2qbzX/struc/2qbzX_M114.pdb 2qbzX/struc/2qbzX_M115.pdb 2qbzX/struc/2qbzX_M116.pdb 2qbzX/struc/2qbzX_M117.pdb 2qbzX/struc/2qbzX_M118.pdb 2qbzX/struc/2qbzX_M119.pdb 2qbzX/struc/2qbzX_M12.pdb 2qbzX/struc/2qbzX_M120.pdb 2qbzX/struc/2qbzX_M121.pdb 2qbzX/struc/2qbzX_M122.pdb 2qbzX/struc/2qbzX_M123.pdb 2qbzX/struc/2qbzX_M124.pdb 2qbzX/struc/2qbzX_M125.pdb 2qbzX/struc/2qbzX_M126.pdb 2qbzX/struc/2qbzX_M127.pdb 2qbzX/struc/2qbzX_M128.pdb 2qbzX/struc/2qbzX_M129.pdb 2qbzX/struc/2qbzX_M13.pdb 2qbzX/struc/2qbzX_M130.pdb 2qbzX/struc/2qbzX_M131.pdb 2qbzX/struc/2qbzX_M132.pdb 2qbzX/struc/2qbzX_M133.pdb 2qbzX/struc/2qbzX_M134.pdb 2qbzX/struc/2qbzX_M135.pdb 2qbzX/struc/2qbzX_M136.pdb 2qbzX/struc/2qbzX_M137.pdb 2qbzX/struc/2qbzX_M138.pdb 2qbzX/struc/2qbzX_M139.pdb 2qbzX/struc/2qbzX_M14.pdb 2qbzX/struc/2qbzX_M140.pdb 2qbzX/struc/2qbzX_M141.pdb 2qbzX/struc/2qbzX_M142.pdb 2qbzX/struc/2qbzX_M143.pdb 2qbzX/struc/2qbzX_M144.pdb 2qbzX/struc/2qbzX_M145.pdb 2qbzX/struc/2qbzX_M146.pdb 2qbzX/struc/2qbzX_M147.pdb 2qbzX/struc/2qbzX_M148.pdb 2qbzX/struc/2qbzX_M149.pdb 2qbzX/struc/2qbzX_M15.pdb 2qbzX/struc/2qbzX_M150.pdb 2qbzX/struc/2qbzX_M151.pdb 2qbzX/struc/2qbzX_M152.pdb 2qbzX/struc/2qbzX_M153.pdb 2qbzX/struc/2qbzX_M154.pdb 2qbzX/struc/2qbzX_M155.pdb 2qbzX/struc/2qbzX_M156.pdb 2qbzX/struc/2qbzX_M157.pdb 2qbzX/struc/2qbzX_M158.pdb 2qbzX/struc/2qbzX_M159.pdb 2qbzX/struc/2qbzX_M16.pdb 2qbzX/struc/2qbzX_M160.pdb 2qbzX/struc/2qbzX_M161.pdb 2qbzX/struc/2qbzX_M162.pdb 2qbzX/struc/2qbzX_M163.pdb 2qbzX/struc/2qbzX_M164.pdb 2qbzX/struc/2qbzX_M165.pdb 2qbzX/struc/2qbzX_M166.pdb 2qbzX/struc/2qbzX_M167.pdb 2qbzX/struc/2qbzX_M168.pdb 2qbzX/struc/2qbzX_M169.pdb 2qbzX/struc/2qbzX_M17.pdb 2qbzX/struc/2qbzX_M170.pdb 2qbzX/struc/2qbzX_M171.pdb 2qbzX/struc/2qbzX_M172.pdb 2qbzX/struc/2qbzX_M173.pdb 2qbzX/struc/2qbzX_M174.pdb 2qbzX/struc/2qbzX_M175.pdb 2qbzX/struc/2qbzX_M176.pdb 2qbzX/struc/2qbzX_M177.pdb 2qbzX/struc/2qbzX_M178.pdb 2qbzX/struc/2qbzX_M179.pdb 2qbzX/struc/2qbzX_M18.pdb 2qbzX/struc/2qbzX_M180.pdb 2qbzX/struc/2qbzX_M181.pdb 2qbzX/struc/2qbzX_M182.pdb 2qbzX/struc/2qbzX_M183.pdb 2qbzX/struc/2qbzX_M184.pdb 2qbzX/struc/2qbzX_M185.pdb 2qbzX/struc/2qbzX_M186.pdb 2qbzX/struc/2qbzX_M187.pdb 2qbzX/struc/2qbzX_M188.pdb 2qbzX/struc/2qbzX_M189.pdb 2qbzX/struc/2qbzX_M19.pdb 2qbzX/struc/2qbzX_M190.pdb 2qbzX/struc/2qbzX_M191.pdb 2qbzX/struc/2qbzX_M192.pdb 2qbzX/struc/2qbzX_M193.pdb 2qbzX/struc/2qbzX_M194.pdb 2qbzX/struc/2qbzX_M195.pdb 2qbzX/struc/2qbzX_M196.pdb 2qbzX/struc/2qbzX_M197.pdb 2qbzX/struc/2qbzX_M198.pdb 2qbzX/struc/2qbzX_M199.pdb 2qbzX/struc/2qbzX_M2.pdb 2qbzX/struc/2qbzX_M20.pdb 2qbzX/struc/2qbzX_M200.pdb 2qbzX/struc/2qbzX_M201.pdb 2qbzX/struc/2qbzX_M202.pdb 2qbzX/struc/2qbzX_M203.pdb 2qbzX/struc/2qbzX_M204.pdb 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3traA/struc/3traA_M137.pdb 3traA/struc/3traA_M140.pdb 3traA/struc/3traA_M159.pdb 3traA/struc/3traA_M160.pdb 3traA/struc/3traA_M166.pdb 3traA/struc/3traA_M173.pdb 3traA/struc/3traA_M188.pdb 3traA/struc/3traA_M189.pdb 3traA/struc/3traA_M192.pdb 3traA/struc/3traA_M194.pdb 3traA/struc/3traA_M196.pdb 3traA/struc/3traA_M2.pdb 3traA/struc/3traA_M202.pdb 3traA/struc/3traA_M206.pdb 3traA/struc/3traA_M210.pdb 3traA/struc/3traA_M213.pdb 3traA/struc/3traA_M217.pdb 3traA/struc/3traA_M221.pdb 3traA/struc/3traA_M226.pdb 3traA/struc/3traA_M23.pdb 3traA/struc/3traA_M234.pdb 3traA/struc/3traA_M240.pdb 3traA/struc/3traA_M247.pdb 3traA/struc/3traA_M250.pdb 3traA/struc/3traA_M253.pdb 3traA/struc/3traA_M260.pdb 3traA/struc/3traA_M264.pdb 3traA/struc/3traA_M266.pdb 3traA/struc/3traA_M282.pdb 3traA/struc/3traA_M283.pdb 3traA/struc/3traA_M300.pdb 3traA/struc/3traA_M311.pdb 3traA/struc/3traA_M314.pdb 3traA/struc/3traA_M332.pdb 3traA/struc/3traA_M338.pdb 3traA/struc/3traA_M368.pdb 3traA/struc/3traA_M382.pdb 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437dA/struc/437dA_M129.pdb 437dA/struc/437dA_M131.pdb 437dA/struc/437dA_M135.pdb 437dA/struc/437dA_M137.pdb 437dA/struc/437dA_M138.pdb 437dA/struc/437dA_M14.pdb 437dA/struc/437dA_M141.pdb 437dA/struc/437dA_M145.pdb 437dA/struc/437dA_M148.pdb 437dA/struc/437dA_M156.pdb 437dA/struc/437dA_M157.pdb 437dA/struc/437dA_M17.pdb 437dA/struc/437dA_M173.pdb 437dA/struc/437dA_M176.pdb 437dA/struc/437dA_M180.pdb 437dA/struc/437dA_M186.pdb 437dA/struc/437dA_M189.pdb 437dA/struc/437dA_M190.pdb 437dA/struc/437dA_M194.pdb 437dA/struc/437dA_M196.pdb 437dA/struc/437dA_M2.pdb 437dA/struc/437dA_M207.pdb 437dA/struc/437dA_M21.pdb 437dA/struc/437dA_M214.pdb 437dA/struc/437dA_M217.pdb 437dA/struc/437dA_M219.pdb 437dA/struc/437dA_M220.pdb 437dA/struc/437dA_M226.pdb 437dA/struc/437dA_M227.pdb 437dA/struc/437dA_M228.pdb 437dA/struc/437dA_M230.pdb 437dA/struc/437dA_M232.pdb 437dA/struc/437dA_M236.pdb 437dA/struc/437dA_M240.pdb 437dA/struc/437dA_M242.pdb 437dA/struc/437dA_M244.pdb 437dA/struc/437dA_M246.pdb 437dA/struc/437dA_M249.pdb 437dA/struc/437dA_M25.pdb 437dA/struc/437dA_M251.pdb 437dA/struc/437dA_M252.pdb 437dA/struc/437dA_M255.pdb 437dA/struc/437dA_M257.pdb 437dA/struc/437dA_M260.pdb 437dA/struc/437dA_M263.pdb 437dA/struc/437dA_M266.pdb 437dA/struc/437dA_M268.pdb 437dA/struc/437dA_M270.pdb 437dA/struc/437dA_M271.pdb 437dA/struc/437dA_M272.pdb 437dA/struc/437dA_M273.pdb 437dA/struc/437dA_M276.pdb 437dA/struc/437dA_M281.pdb 437dA/struc/437dA_M283.pdb 437dA/struc/437dA_M299.pdb 437dA/struc/437dA_M30.pdb 437dA/struc/437dA_M301.pdb 437dA/struc/437dA_M305.pdb 437dA/struc/437dA_M311.pdb 437dA/struc/437dA_M315.pdb 437dA/struc/437dA_M316.pdb 437dA/struc/437dA_M317.pdb 437dA/struc/437dA_M318.pdb 437dA/struc/437dA_M319.pdb 437dA/struc/437dA_M326.pdb 437dA/struc/437dA_M328.pdb 437dA/struc/437dA_M329.pdb 437dA/struc/437dA_M335.pdb 437dA/struc/437dA_M339.pdb 437dA/struc/437dA_M342.pdb 437dA/struc/437dA_M348.pdb 437dA/struc/437dA_M350.pdb 437dA/struc/437dA_M353.pdb 437dA/struc/437dA_M357.pdb 437dA/struc/437dA_M358.pdb 437dA/struc/437dA_M360.pdb 437dA/struc/437dA_M363.pdb 437dA/struc/437dA_M364.pdb 437dA/struc/437dA_M366.pdb 437dA/struc/437dA_M37.pdb 437dA/struc/437dA_M375.pdb 437dA/struc/437dA_M376.pdb 437dA/struc/437dA_M379.pdb 437dA/struc/437dA_M387.pdb 437dA/struc/437dA_M388.pdb 437dA/struc/437dA_M393.pdb 437dA/struc/437dA_M398.pdb 437dA/struc/437dA_M399.pdb 437dA/struc/437dA_M4.pdb 437dA/struc/437dA_M402.pdb 437dA/struc/437dA_M403.pdb 437dA/struc/437dA_M404.pdb 437dA/struc/437dA_M405.pdb 437dA/struc/437dA_M413.pdb 437dA/struc/437dA_M42.pdb 437dA/struc/437dA_M426.pdb 437dA/struc/437dA_M428.pdb 437dA/struc/437dA_M43.pdb 437dA/struc/437dA_M433.pdb 437dA/struc/437dA_M434.pdb 437dA/struc/437dA_M435.pdb 437dA/struc/437dA_M441.pdb 437dA/struc/437dA_M446.pdb 437dA/struc/437dA_M45.pdb 437dA/struc/437dA_M453.pdb 437dA/struc/437dA_M454.pdb 437dA/struc/437dA_M456.pdb 437dA/struc/437dA_M458.pdb 437dA/struc/437dA_M46.pdb 437dA/struc/437dA_M460.pdb 437dA/struc/437dA_M462.pdb 437dA/struc/437dA_M466.pdb 437dA/struc/437dA_M470.pdb 437dA/struc/437dA_M478.pdb 437dA/struc/437dA_M484.pdb 437dA/struc/437dA_M489.pdb 437dA/struc/437dA_M491.pdb 437dA/struc/437dA_M492.pdb 437dA/struc/437dA_M499.pdb 437dA/struc/437dA_M51.pdb 437dA/struc/437dA_M55.pdb 437dA/struc/437dA_M57.pdb 437dA/struc/437dA_M59.pdb 437dA/struc/437dA_M79.pdb 437dA/struc/437dA_M8.pdb 437dA/struc/437dA_M86.pdb 437dA/struc/437dA_M88.pdb 437dA/struc/437dA_M89.pdb 437dA/struc/437dA_M96.pdb 437dA/struc/437dA_M98.pdb 6tnaA/struc/6tnaA_M100.pdb 6tnaA/struc/6tnaA_M101.pdb 6tnaA/struc/6tnaA_M102.pdb 6tnaA/struc/6tnaA_M103.pdb 6tnaA/struc/6tnaA_M104.pdb 6tnaA/struc/6tnaA_M106.pdb 6tnaA/struc/6tnaA_M107.pdb 6tnaA/struc/6tnaA_M110.pdb 6tnaA/struc/6tnaA_M112.pdb 6tnaA/struc/6tnaA_M113.pdb 6tnaA/struc/6tnaA_M115.pdb 6tnaA/struc/6tnaA_M116.pdb 6tnaA/struc/6tnaA_M117.pdb 6tnaA/struc/6tnaA_M120.pdb 6tnaA/struc/6tnaA_M121.pdb 6tnaA/struc/6tnaA_M122.pdb 6tnaA/struc/6tnaA_M124.pdb 6tnaA/struc/6tnaA_M125.pdb 6tnaA/struc/6tnaA_M128.pdb 6tnaA/struc/6tnaA_M130.pdb 6tnaA/struc/6tnaA_M131.pdb 6tnaA/struc/6tnaA_M132.pdb 6tnaA/struc/6tnaA_M133.pdb 6tnaA/struc/6tnaA_M134.pdb 6tnaA/struc/6tnaA_M135.pdb 6tnaA/struc/6tnaA_M137.pdb 6tnaA/struc/6tnaA_M138.pdb 6tnaA/struc/6tnaA_M143.pdb 6tnaA/struc/6tnaA_M146.pdb 6tnaA/struc/6tnaA_M149.pdb 6tnaA/struc/6tnaA_M15.pdb 6tnaA/struc/6tnaA_M153.pdb 6tnaA/struc/6tnaA_M155.pdb 6tnaA/struc/6tnaA_M156.pdb 6tnaA/struc/6tnaA_M157.pdb 6tnaA/struc/6tnaA_M158.pdb 6tnaA/struc/6tnaA_M16.pdb 6tnaA/struc/6tnaA_M161.pdb 6tnaA/struc/6tnaA_M162.pdb 6tnaA/struc/6tnaA_M164.pdb 6tnaA/struc/6tnaA_M166.pdb 6tnaA/struc/6tnaA_M168.pdb 6tnaA/struc/6tnaA_M17.pdb 6tnaA/struc/6tnaA_M170.pdb 6tnaA/struc/6tnaA_M171.pdb 6tnaA/struc/6tnaA_M172.pdb 6tnaA/struc/6tnaA_M173.pdb 6tnaA/struc/6tnaA_M174.pdb 6tnaA/struc/6tnaA_M176.pdb 6tnaA/struc/6tnaA_M177.pdb 6tnaA/struc/6tnaA_M178.pdb 6tnaA/struc/6tnaA_M179.pdb 6tnaA/struc/6tnaA_M180.pdb 6tnaA/struc/6tnaA_M181.pdb 6tnaA/struc/6tnaA_M183.pdb 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6tnaA/struc/6tnaA_M9.pdb 6tnaA/struc/6tnaA_M90.pdb 6tnaA/struc/6tnaA_M92.pdb 6tnaA/struc/6tnaA_M93.pdb 6tnaA/struc/6tnaA_M94.pdb 6tnaA/struc/6tnaA_M95.pdb 6tnaA/struc/6tnaA_M96.pdb 6tnaA/struc/6tnaA_M97.pdb 6tnaA/struc/6tnaA_M99.pdb diff --git a/rna_tools/tools/automatix/mqaprna_run.sh b/rna_tools/tools/automatix/mqaprna_run.sh new file mode 100644 index 000000000..28c92b66a --- /dev/null +++ b/rna_tools/tools/automatix/mqaprna_run.sh @@ -0,0 +1 @@ + mqaprna -m 100 -t FARNA_hires -o FARNA_hires 3f1hB/struc/3f1hB_M491.pdb 3f1hB/struc/3f1hB_M204.pdb 3f1hB/struc/3f1hB_M425.pdb 3f1hB/struc/3f1hB_M404.pdb 3f1hB/struc/3f1hB_M330.pdb 3f1hB/struc/3f1hB_M57.pdb 3f1hB/struc/3f1hB_M337.pdb 3f1hB/struc/3f1hB_M217.pdb 3f1hB/struc/3f1hB_M213.pdb 3f1hB/struc/3f1hB_M190.pdb 3f1hB/struc/3f1hB_M141.pdb 3f1hB/struc/3f1hB_M380.pdb 3f1hB/struc/3f1hB_M143.pdb 3f1hB/struc/3f1hB_M465.pdb 3f1hB/struc/3f1hB_M48.pdb 3f1hB/struc/3f1hB_M78.pdb 3f1hB/struc/3f1hB_M500.pdb 3f1hB/struc/3f1hB_M450.pdb 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1f1tA/struc/1f1tA_M209.pdb 1f1tA/struc/1f1tA_M165.pdb 1f1tA/struc/1f1tA_M352.pdb 1f1tA/struc/1f1tA_M22.pdb 1f1tA/struc/1f1tA_M299.pdb 1f1tA/struc/1f1tA_M239.pdb 1f1tA/struc/1f1tA_M205.pdb 1f1tA/struc/1f1tA_M283.pdb 1f1tA/struc/1f1tA_M236.pdb 1f1tA/struc/1f1tA_M390.pdb 1f1tA/struc/1f1tA_M452.pdb 1f1tA/struc/1f1tA_M273.pdb 1f1tA/struc/1f1tA_M493.pdb 1f1tA/struc/1f1tA_M276.pdb 1f1tA/struc/1f1tA_M149.pdb 1f1tA/struc/1f1tA_M309.pdb 1f1tA/struc/1f1tA_M269.pdb 1f1tA/struc/1f1tA_M338.pdb 1f1tA/struc/1f1tA_M148.pdb 1f1tA/struc/1f1tA_M221.pdb 1f1tA/struc/1f1tA_M294.pdb 1f1tA/struc/1f1tA_M389.pdb 1f1tA/struc/1f1tA_M252.pdb 1f1tA/struc/1f1tA_M376.pdb 1f1tA/struc/1f1tA_M139.pdb 1f1tA/struc/1f1tA_M245.pdb 1f1tA/struc/1f1tA_M336.pdb 1f1tA/struc/1f1tA_M293.pdb 1f1tA/struc/1f1tA_M110.pdb 1f1tA/struc/1f1tA_M333.pdb 1f1tA/struc/1f1tA_M217.pdb 1f1tA/struc/1f1tA_M232.pdb 1f1tA/struc/1f1tA_M296.pdb 1f1tA/struc/1f1tA_M301.pdb 1f1tA/struc/1f1tA_M421.pdb 1f1tA/struc/1f1tA_M95.pdb 1f1tA/struc/1f1tA_M285.pdb 1f1tA/struc/1f1tA_M420.pdb 1f1tA/struc/1f1tA_M219.pdb 1f1tA/struc/1f1tA_M28.pdb 2anrB/struc/2anrB_M54.pdb 2anrB/struc/2anrB_M205.pdb 1njp5/struc/1njp5_M98.pdb 1njp5/struc/1njp5_M74.pdb 1njp5/struc/1njp5_M128.pdb 1njp5/struc/1njp5_M2.pdb 1njp5/struc/1njp5_M354.pdb 1njp5/struc/1njp5_M454.pdb 1njp5/struc/1njp5_M319.pdb 1njp5/struc/1njp5_M51.pdb 1njp5/struc/1njp5_M135.pdb 1njp5/struc/1njp5_M262.pdb 1njp5/struc/1njp5_M473.pdb 1njp5/struc/1njp5_M333.pdb 1njp5/struc/1njp5_M122.pdb 1njp5/struc/1njp5_M176.pdb 1njp5/struc/1njp5_M219.pdb 1njp5/struc/1njp5_M116.pdb 1njp5/struc/1njp5_M165.pdb 1njp5/struc/1njp5_M480.pdb 1njp5/struc/1njp5_M390.pdb 1njp5/struc/1njp5_M28.pdb 1njp5/struc/1njp5_M404.pdb 1njp5/struc/1njp5_M273.pdb 1njp5/struc/1njp5_M321.pdb 1njp5/struc/1njp5_M223.pdb 1njp5/struc/1njp5_M443.pdb 1njp5/struc/1njp5_M34.pdb 1njp5/struc/1njp5_M500.pdb 1njp5/struc/1njp5_M465.pdb 1njp5/struc/1njp5_M355.pdb 1njp5/struc/1njp5_M164.pdb 1njp5/struc/1njp5_M111.pdb 1njp5/struc/1njp5_M166.pdb 1njp5/struc/1njp5_M499.pdb 1njp5/struc/1njp5_M10.pdb 1njp5/struc/1njp5_M57.pdb 1njp5/struc/1njp5_M153.pdb 1njp5/struc/1njp5_M313.pdb 1njp5/struc/1njp5_M474.pdb 1njp5/struc/1njp5_M144.pdb 1njp5/struc/1njp5_M11.pdb 1njp5/struc/1njp5_M351.pdb 1njp5/struc/1njp5_M199.pdb 1njp5/struc/1njp5_M216.pdb 1njp5/struc/1njp5_M331.pdb 1njp5/struc/1njp5_M103.pdb 1njp5/struc/1njp5_M346.pdb 1njp5/struc/1njp5_M315.pdb 1njp5/struc/1njp5_M407.pdb 1njp5/struc/1njp5_M7.pdb 1njp5/struc/1njp5_M246.pdb 1njp5/struc/1njp5_M193.pdb 1njp5/struc/1njp5_M85.pdb 1njp5/struc/1njp5_M438.pdb 1njp5/struc/1njp5_M432.pdb 1njp5/struc/1njp5_M27.pdb 1njp5/struc/1njp5_M334.pdb 1njp5/struc/1njp5_M403.pdb 1njp5/struc/1njp5_M269.pdb 1njp5/struc/1njp5_M89.pdb 1njp5/struc/1njp5_M217.pdb 1njp5/struc/1njp5_M173.pdb 1njp5/struc/1njp5_M425.pdb 1njp5/struc/1njp5_M279.pdb 1njp5/struc/1njp5_M268.pdb 1njp5/struc/1njp5_M102.pdb 1njp5/struc/1njp5_M374.pdb 1njp5/struc/1njp5_M304.pdb 1njp5/struc/1njp5_M368.pdb 1njp5/struc/1njp5_M127.pdb 1njp5/struc/1njp5_M385.pdb 1njp5/struc/1njp5_M46.pdb 1njp5/struc/1njp5_M218.pdb 1njp5/struc/1njp5_M31.pdb 1njp5/struc/1njp5_M257.pdb 1njp5/struc/1njp5_M3.pdb 1njp5/struc/1njp5_M431.pdb 1njp5/struc/1njp5_M13.pdb 1njp5/struc/1njp5_M263.pdb 1njp5/struc/1njp5_M340.pdb 1njp5/struc/1njp5_M301.pdb 1njp5/struc/1njp5_M72.pdb 1njp5/struc/1njp5_M280.pdb 1njp5/struc/1njp5_M358.pdb 1njp5/struc/1njp5_M18.pdb 1njp5/struc/1njp5_M240.pdb 1njp5/struc/1njp5_M220.pdb 1njp5/struc/1njp5_M215.pdb 1njp5/struc/1njp5_M69.pdb 1njp5/struc/1njp5_M130.pdb 1njp5/struc/1njp5_M423.pdb 1njp5/struc/1njp5_M175.pdb 1njp5/struc/1njp5_M33.pdb 1njp5/struc/1njp5_M405.pdb 1njp5/struc/1njp5_M233.pdb 1njp5/struc/1njp5_M21.pdb 1njp5/struc/1njp5_M308.pdb 1njp5/struc/1njp5_M62.pdb 1njp5/struc/1njp5_M453.pdb 1njp5/struc/1njp5_M286.pdb 1njp5/struc/1njp5_M434.pdb 1njp5/struc/1njp5_M371.pdb 1njp5/struc/1njp5_M124.pdb 1njp5/struc/1njp5_M44.pdb 1njp5/struc/1njp5_M36.pdb 1njp5/struc/1njp5_M409.pdb 1njp5/struc/1njp5_M270.pdb 1njp5/struc/1njp5_M81.pdb 1njp5/struc/1njp5_M260.pdb 1njp5/struc/1njp5_M187.pdb 1njp5/struc/1njp5_M4.pdb 1njp5/struc/1njp5_M185.pdb 1njp5/struc/1njp5_M162.pdb 1njp5/struc/1njp5_M464.pdb 1njp5/struc/1njp5_M370.pdb 1njp5/struc/1njp5_M64.pdb 1njp5/struc/1njp5_M458.pdb 1njp5/struc/1njp5_M55.pdb 1njp5/struc/1njp5_M35.pdb 1njp5/struc/1njp5_M22.pdb 1njp5/struc/1njp5_M281.pdb 1njp5/struc/1njp5_M421.pdb 1njp5/struc/1njp5_M288.pdb 1njp5/struc/1njp5_M427.pdb 1njp5/struc/1njp5_M6.pdb 1njp5/struc/1njp5_M364.pdb 1njp5/struc/1njp5_M299.pdb 1njp5/struc/1njp5_M398.pdb 1njp5/struc/1njp5_M112.pdb 1njp5/struc/1njp5_M24.pdb 1njp5/struc/1njp5_M121.pdb 1njp5/struc/1njp5_M440.pdb 1njp5/struc/1njp5_M491.pdb 1njp5/struc/1njp5_M9.pdb 1njp5/struc/1njp5_M157.pdb 1njp5/struc/1njp5_M325.pdb 1njp5/struc/1njp5_M401.pdb 1njp5/struc/1njp5_M151.pdb 1njp5/struc/1njp5_M352.pdb 1njp5/struc/1njp5_M61.pdb 1njp5/struc/1njp5_M232.pdb 1njp5/struc/1njp5_M136.pdb 1njp5/struc/1njp5_M460.pdb 1njp5/struc/1njp5_M77.pdb 1njp5/struc/1njp5_M252.pdb 1njp5/struc/1njp5_M360.pdb 1njp5/struc/1njp5_M462.pdb 1njp5/struc/1njp5_M411.pdb 1njp5/struc/1njp5_M181.pdb 1njp5/struc/1njp5_M347.pdb 1njp5/struc/1njp5_M413.pdb 1njp5/struc/1njp5_M487.pdb 1njp5/struc/1njp5_M376.pdb 1njp5/struc/1njp5_M439.pdb 1njp5/struc/1njp5_M489.pdb 1njp5/struc/1njp5_M245.pdb 1njp5/struc/1njp5_M101.pdb 1njp5/struc/1njp5_M382.pdb 1njp5/struc/1njp5_M475.pdb 1njp5/struc/1njp5_M498.pdb 1njp5/struc/1njp5_M129.pdb 1njp5/struc/1njp5_M393.pdb 1mfqA/struc/1mfqA_M109.pdb 1mfqA/struc/1mfqA_M136.pdb 1mfqA/struc/1mfqA_M294.pdb 1mfqA/struc/1mfqA_M256.pdb 1mfqA/struc/1mfqA_M147.pdb 1mfqA/struc/1mfqA_M238.pdb 1mfqA/struc/1mfqA_M85.pdb 1mfqA/struc/1mfqA_M26.pdb 1mfqA/struc/1mfqA_M326.pdb 1mfqA/struc/1mfqA_M337.pdb 1mfqA/struc/1mfqA_M481.pdb 1mfqA/struc/1mfqA_M453.pdb 2bh2D/struc/2bh2D_M325.pdb 2bh2D/struc/2bh2D_M210.pdb 2bh2D/struc/2bh2D_M139.pdb 2bh2D/struc/2bh2D_M47.pdb 2bh2D/struc/2bh2D_M329.pdb 2bh2D/struc/2bh2D_M500.pdb 2bh2D/struc/2bh2D_M402.pdb 2bh2D/struc/2bh2D_M493.pdb 2bh2D/struc/2bh2D_M86.pdb 2bh2D/struc/2bh2D_M202.pdb 2bh2D/struc/2bh2D_M480.pdb 2bh2D/struc/2bh2D_M447.pdb 2bh2D/struc/2bh2D_M454.pdb 2bh2D/struc/2bh2D_M465.pdb 2bh2D/struc/2bh2D_M439.pdb 2bh2D/struc/2bh2D_M357.pdb 2bh2D/struc/2bh2D_M236.pdb 2bh2D/struc/2bh2D_M165.pdb 2bh2D/struc/2bh2D_M331.pdb 2bh2D/struc/2bh2D_M50.pdb 2bh2D/struc/2bh2D_M473.pdb 2bh2D/struc/2bh2D_M51.pdb 2bh2D/struc/2bh2D_M306.pdb 2bh2D/struc/2bh2D_M406.pdb 2bh2D/struc/2bh2D_M438.pdb 2bh2D/struc/2bh2D_M65.pdb 2bh2D/struc/2bh2D_M18.pdb 2bh2D/struc/2bh2D_M267.pdb 2bh2D/struc/2bh2D_M92.pdb 2bh2D/struc/2bh2D_M125.pdb 2bh2D/struc/2bh2D_M159.pdb 2bh2D/struc/2bh2D_M294.pdb 2bh2D/struc/2bh2D_M374.pdb 2bh2D/struc/2bh2D_M196.pdb 2bh2D/struc/2bh2D_M155.pdb 2bh2D/struc/2bh2D_M41.pdb 2bh2D/struc/2bh2D_M182.pdb 2bh2D/struc/2bh2D_M348.pdb 2bh2D/struc/2bh2D_M477.pdb 2bh2D/struc/2bh2D_M411.pdb 2bh2D/struc/2bh2D_M293.pdb 2bh2D/struc/2bh2D_M376.pdb 2bh2D/struc/2bh2D_M5.pdb 2bh2D/struc/2bh2D_M207.pdb 2bh2D/struc/2bh2D_M244.pdb 2bh2D/struc/2bh2D_M310.pdb 2bh2D/struc/2bh2D_M186.pdb 2bh2D/struc/2bh2D_M273.pdb 2bh2D/struc/2bh2D_M225.pdb 2bh2D/struc/2bh2D_M302.pdb 2bh2D/struc/2bh2D_M233.pdb 2bh2D/struc/2bh2D_M372.pdb 2bh2D/struc/2bh2D_M282.pdb 2bh2D/struc/2bh2D_M26.pdb 2bh2D/struc/2bh2D_M71.pdb 2bh2D/struc/2bh2D_M478.pdb 2bh2D/struc/2bh2D_M393.pdb 2bh2D/struc/2bh2D_M79.pdb 2bh2D/struc/2bh2D_M7.pdb 2bh2D/struc/2bh2D_M452.pdb 2bh2D/struc/2bh2D_M362.pdb 2bh2D/struc/2bh2D_M102.pdb 2bh2D/struc/2bh2D_M171.pdb 2bh2D/struc/2bh2D_M63.pdb 2bh2D/struc/2bh2D_M390.pdb 2bh2D/struc/2bh2D_M491.pdb 2bh2D/struc/2bh2D_M420.pdb 2bh2D/struc/2bh2D_M463.pdb 2bh2D/struc/2bh2D_M460.pdb 2bh2D/struc/2bh2D_M55.pdb 2bh2D/struc/2bh2D_M285.pdb 2bh2D/struc/2bh2D_M116.pdb 2bh2D/struc/2bh2D_M163.pdb 2bh2D/struc/2bh2D_M400.pdb 2bh2D/struc/2bh2D_M335.pdb 2bh2D/struc/2bh2D_M333.pdb 2bh2D/struc/2bh2D_M89.pdb 2bh2D/struc/2bh2D_M490.pdb 2bh2D/struc/2bh2D_M132.pdb 2bh2D/struc/2bh2D_M278.pdb 2bh2D/struc/2bh2D_M489.pdb 2bh2D/struc/2bh2D_M35.pdb 2bh2D/struc/2bh2D_M268.pdb 2bh2D/struc/2bh2D_M20.pdb 2bh2D/struc/2bh2D_M361.pdb 2bh2D/struc/2bh2D_M8.pdb 2bh2D/struc/2bh2D_M119.pdb 2bh2D/struc/2bh2D_M482.pdb 2bh2D/struc/2bh2D_M269.pdb 2bh2D/struc/2bh2D_M428.pdb 2bh2D/struc/2bh2D_M138.pdb 2bh2D/struc/2bh2D_M265.pdb 2bh2D/struc/2bh2D_M347.pdb 2bh2D/struc/2bh2D_M45.pdb 2bh2D/struc/2bh2D_M421.pdb 2bh2D/struc/2bh2D_M15.pdb 2bh2D/struc/2bh2D_M468.pdb 2bh2D/struc/2bh2D_M105.pdb 2bh2D/struc/2bh2D_M425.pdb 2bh2D/struc/2bh2D_M97.pdb 2bh2D/struc/2bh2D_M75.pdb 2bh2D/struc/2bh2D_M219.pdb 2bh2D/struc/2bh2D_M368.pdb 2bh2D/struc/2bh2D_M17.pdb 2bh2D/struc/2bh2D_M322.pdb 2bh2D/struc/2bh2D_M204.pdb 2bh2D/struc/2bh2D_M156.pdb 2bh2D/struc/2bh2D_M100.pdb 2bh2D/struc/2bh2D_M261.pdb 2bh2D/struc/2bh2D_M375.pdb 2bh2D/struc/2bh2D_M435.pdb 2bh2D/struc/2bh2D_M399.pdb 2bh2D/struc/2bh2D_M137.pdb 2bh2D/struc/2bh2D_M461.pdb 2bh2D/struc/2bh2D_M341.pdb 2bh2D/struc/2bh2D_M458.pdb 2bh2D/struc/2bh2D_M318.pdb 2bh2D/struc/2bh2D_M436.pdb 2bh2D/struc/2bh2D_M433.pdb 2bh2D/struc/2bh2D_M237.pdb 2bh2D/struc/2bh2D_M427.pdb 2bh2D/struc/2bh2D_M279.pdb 2bh2D/struc/2bh2D_M37.pdb 2bh2D/struc/2bh2D_M54.pdb 2bh2D/struc/2bh2D_M197.pdb 2bh2D/struc/2bh2D_M1.pdb 2bh2D/struc/2bh2D_M432.pdb 2bh2D/struc/2bh2D_M153.pdb 2bh2D/struc/2bh2D_M115.pdb 2bh2D/struc/2bh2D_M350.pdb 2bh2D/struc/2bh2D_M147.pdb 2bh2D/struc/2bh2D_M83.pdb 2bh2D/struc/2bh2D_M211.pdb 2bh2D/struc/2bh2D_M475.pdb 2bh2D/struc/2bh2D_M78.pdb 2bh2D/struc/2bh2D_M392.pdb 2bh2D/struc/2bh2D_M443.pdb 2bh2D/struc/2bh2D_M476.pdb 2bh2D/struc/2bh2D_M192.pdb 2bh2D/struc/2bh2D_M367.pdb 2bh2D/struc/2bh2D_M177.pdb 2bh2D/struc/2bh2D_M298.pdb 2bh2D/struc/2bh2D_M281.pdb 2bh2D/struc/2bh2D_M64.pdb 2bh2D/struc/2bh2D_M299.pdb 2bh2D/struc/2bh2D_M484.pdb 2bh2D/struc/2bh2D_M288.pdb 2bh2D/struc/2bh2D_M266.pdb 2bh2D/struc/2bh2D_M373.pdb 2bh2D/struc/2bh2D_M217.pdb 2bh2D/struc/2bh2D_M134.pdb 2bh2D/struc/2bh2D_M87.pdb 2bh2D/struc/2bh2D_M178.pdb 2bh2D/struc/2bh2D_M152.pdb 2bh2D/struc/2bh2D_M36.pdb 2bh2D/struc/2bh2D_M107.pdb 2bh2D/struc/2bh2D_M254.pdb 2bh2D/struc/2bh2D_M486.pdb 2bh2D/struc/2bh2D_M370.pdb 2bh2D/struc/2bh2D_M31.pdb 2bh2D/struc/2bh2D_M334.pdb 2bh2D/struc/2bh2D_M498.pdb 2bh2D/struc/2bh2D_M451.pdb 2bh2D/struc/2bh2D_M434.pdb 2bh2D/struc/2bh2D_M84.pdb 2bh2D/struc/2bh2D_M131.pdb 2bh2D/struc/2bh2D_M33.pdb 2bh2D/struc/2bh2D_M130.pdb 2bh2D/struc/2bh2D_M113.pdb 2bh2D/struc/2bh2D_M382.pdb 2bh2D/struc/2bh2D_M27.pdb 2bh2D/struc/2bh2D_M235.pdb 2bh2D/struc/2bh2D_M77.pdb 2bh2D/struc/2bh2D_M387.pdb 2bh2D/struc/2bh2D_M28.pdb 2bh2D/struc/2bh2D_M354.pdb 2bh2D/struc/2bh2D_M343.pdb 2bh2D/struc/2bh2D_M21.pdb 2bh2D/struc/2bh2D_M431.pdb 2bh2D/struc/2bh2D_M467.pdb 2bh2D/struc/2bh2D_M304.pdb 2bh2D/struc/2bh2D_M410.pdb 2bh2D/struc/2bh2D_M44.pdb 2bh2D/struc/2bh2D_M143.pdb 2bh2D/struc/2bh2D_M429.pdb 2bh2D/struc/2bh2D_M68.pdb 2bh2D/struc/2bh2D_M208.pdb 2bh2D/struc/2bh2D_M270.pdb 2bh2D/struc/2bh2D_M291.pdb 2bh2D/struc/2bh2D_M151.pdb 2bh2D/struc/2bh2D_M395.pdb 2bh2D/struc/2bh2D_M414.pdb 2bh2D/struc/2bh2D_M499.pdb 2bh2D/struc/2bh2D_M231.pdb 2bh2D/struc/2bh2D_M358.pdb 2bh2D/struc/2bh2D_M62.pdb 2bh2D/struc/2bh2D_M418.pdb 2bh2D/struc/2bh2D_M494.pdb 2bh2D/struc/2bh2D_M487.pdb 2bh2D/struc/2bh2D_M394.pdb 2bh2D/struc/2bh2D_M238.pdb 2bh2D/struc/2bh2D_M257.pdb 2bh2D/struc/2bh2D_M290.pdb 2bh2D/struc/2bh2D_M260.pdb 2bh2D/struc/2bh2D_M175.pdb 2bh2D/struc/2bh2D_M48.pdb 2bh2D/struc/2bh2D_M416.pdb 2bh2D/struc/2bh2D_M471.pdb 2bh2D/struc/2bh2D_M168.pdb 2bh2D/struc/2bh2D_M144.pdb 2bh2D/struc/2bh2D_M82.pdb 2bh2D/struc/2bh2D_M148.pdb 2bh2D/struc/2bh2D_M9.pdb 2bh2D/struc/2bh2D_M32.pdb 2bh2D/struc/2bh2D_M403.pdb 2bh2D/struc/2bh2D_M397.pdb 2bh2D/struc/2bh2D_M337.pdb 2bh2D/struc/2bh2D_M43.pdb 2bh2D/struc/2bh2D_M12.pdb 2bh2D/struc/2bh2D_M227.pdb 2bh2D/struc/2bh2D_M287.pdb 2bh2D/struc/2bh2D_M262.pdb 2bh2D/struc/2bh2D_M123.pdb 2bh2D/struc/2bh2D_M444.pdb 2bh2D/struc/2bh2D_M110.pdb 2bh2D/struc/2bh2D_M312.pdb 2bh2D/struc/2bh2D_M430.pdb 2bh2D/struc/2bh2D_M172.pdb 2bh2D/struc/2bh2D_M316.pdb 2bh2D/struc/2bh2D_M300.pdb 2bh2D/struc/2bh2D_M88.pdb 2bh2D/struc/2bh2D_M366.pdb 2bh2D/struc/2bh2D_M289.pdb 2bh2D/struc/2bh2D_M194.pdb 2bh2D/struc/2bh2D_M255.pdb 2bh2D/struc/2bh2D_M470.pdb 2bh2D/struc/2bh2D_M258.pdb 2bh2D/struc/2bh2D_M398.pdb 2bh2D/struc/2bh2D_M69.pdb 2bh2D/struc/2bh2D_M286.pdb 2bh2D/struc/2bh2D_M215.pdb 2bh2D/struc/2bh2D_M346.pdb 2bh2D/struc/2bh2D_M49.pdb 2bh2D/struc/2bh2D_M338.pdb 2bh2D/struc/2bh2D_M345.pdb 2bh2D/struc/2bh2D_M474.pdb 2bh2D/struc/2bh2D_M280.pdb 1q2sF/struc/1q2sF_M433.pdb 1q2sF/struc/1q2sF_M70.pdb 1q2sF/struc/1q2sF_M382.pdb 1q2sF/struc/1q2sF_M370.pdb 1q2sF/struc/1q2sF_M459.pdb 1q2sF/struc/1q2sF_M148.pdb 1q2sF/struc/1q2sF_M101.pdb 1q2sF/struc/1q2sF_M213.pdb 1q2sF/struc/1q2sF_M269.pdb 1q2sF/struc/1q2sF_M26.pdb 1q2sF/struc/1q2sF_M41.pdb 1q2sF/struc/1q2sF_M108.pdb 1q2sF/struc/1q2sF_M22.pdb 1q2sF/struc/1q2sF_M490.pdb 1q2sF/struc/1q2sF_M135.pdb 1q2sF/struc/1q2sF_M39.pdb 1q2sF/struc/1q2sF_M78.pdb 1q2sF/struc/1q2sF_M411.pdb 1q2sF/struc/1q2sF_M410.pdb 1q2sF/struc/1q2sF_M232.pdb 1q2sF/struc/1q2sF_M52.pdb 1q2sF/struc/1q2sF_M174.pdb 1q2sF/struc/1q2sF_M392.pdb 1q2sF/struc/1q2sF_M103.pdb 1q2sF/struc/1q2sF_M271.pdb 1q2sF/struc/1q2sF_M138.pdb 1q2sF/struc/1q2sF_M353.pdb 1q2sF/struc/1q2sF_M372.pdb 1q2sF/struc/1q2sF_M487.pdb 1q2sF/struc/1q2sF_M369.pdb 1q2sF/struc/1q2sF_M201.pdb 1q2sF/struc/1q2sF_M200.pdb 1q2sF/struc/1q2sF_M224.pdb 1q2sF/struc/1q2sF_M415.pdb 1q2sF/struc/1q2sF_M497.pdb 1q2sF/struc/1q2sF_M310.pdb 1q2sF/struc/1q2sF_M290.pdb 1q2sF/struc/1q2sF_M439.pdb 1q2sF/struc/1q2sF_M209.pdb 1q2sF/struc/1q2sF_M167.pdb 1q2sF/struc/1q2sF_M421.pdb 1q2sF/struc/1q2sF_M494.pdb 1q2sF/struc/1q2sF_M136.pdb 1q2sF/struc/1q2sF_M485.pdb 1q2sF/struc/1q2sF_M64.pdb 1q2sF/struc/1q2sF_M207.pdb 1q2sF/struc/1q2sF_M165.pdb 1q2sF/struc/1q2sF_M403.pdb 1q2sF/struc/1q2sF_M384.pdb 1q2sF/struc/1q2sF_M434.pdb 1q2sF/struc/1q2sF_M406.pdb 1q2sF/struc/1q2sF_M235.pdb 1q2sF/struc/1q2sF_M484.pdb 1q2sF/struc/1q2sF_M436.pdb 1q2sF/struc/1q2sF_M317.pdb 1q2sF/struc/1q2sF_M316.pdb 1q2sF/struc/1q2sF_M295.pdb 1q2sF/struc/1q2sF_M471.pdb 1q2sF/struc/1q2sF_M157.pdb 1q2sF/struc/1q2sF_M33.pdb 1q2sF/struc/1q2sF_M397.pdb 1q2sF/struc/1q2sF_M467.pdb 1q2sF/struc/1q2sF_M139.pdb 1q2sF/struc/1q2sF_M189.pdb 1q2sF/struc/1q2sF_M31.pdb 1q2sF/struc/1q2sF_M336.pdb 1q2sF/struc/1q2sF_M480.pdb 1q2sF/struc/1q2sF_M194.pdb 1q2sF/struc/1q2sF_M400.pdb 1q2sF/struc/1q2sF_M351.pdb 1q2sF/struc/1q2sF_M237.pdb 1q2sF/struc/1q2sF_M134.pdb 1q2sF/struc/1q2sF_M387.pdb 1q2sF/struc/1q2sF_M20.pdb 1q2sF/struc/1q2sF_M376.pdb 1q2sF/struc/1q2sF_M143.pdb 1q2sF/struc/1q2sF_M420.pdb 1q2sF/struc/1q2sF_M32.pdb 1q2sF/struc/1q2sF_M306.pdb 1q2sF/struc/1q2sF_M273.pdb 1q2sF/struc/1q2sF_M254.pdb 1q2sF/struc/1q2sF_M390.pdb 1q2sF/struc/1q2sF_M196.pdb 1q2sF/struc/1q2sF_M265.pdb 1q2sF/struc/1q2sF_M145.pdb 1q2sF/struc/1q2sF_M422.pdb 1q2sF/struc/1q2sF_M191.pdb 1q2sF/struc/1q2sF_M144.pdb 1q2sF/struc/1q2sF_M93.pdb 1q2sF/struc/1q2sF_M124.pdb 1q2sF/struc/1q2sF_M122.pdb 1q2sF/struc/1q2sF_M398.pdb 1q2sF/struc/1q2sF_M462.pdb 1q2sF/struc/1q2sF_M59.pdb 1q2sF/struc/1q2sF_M263.pdb 1q2sF/struc/1q2sF_M116.pdb 1q2sF/struc/1q2sF_M441.pdb 1q2sF/struc/1q2sF_M24.pdb 1q2sF/struc/1q2sF_M171.pdb 1q2sF/struc/1q2sF_M106.pdb 1q2sF/struc/1q2sF_M456.pdb 1q2sF/struc/1q2sF_M341.pdb 1q2sF/struc/1q2sF_M339.pdb 1q2sF/struc/1q2sF_M298.pdb 1q2sF/struc/1q2sF_M239.pdb 1q2sF/struc/1q2sF_M276.pdb 1q2sF/struc/1q2sF_M229.pdb 1q2sF/struc/1q2sF_M408.pdb 1q2sF/struc/1q2sF_M338.pdb 1q2sF/struc/1q2sF_M89.pdb 1q2sF/struc/1q2sF_M206.pdb 1q2sF/struc/1q2sF_M61.pdb 1q2sF/struc/1q2sF_M75.pdb 1q2sF/struc/1q2sF_M244.pdb 1q2sF/struc/1q2sF_M291.pdb 1q2sF/struc/1q2sF_M308.pdb 1q2sF/struc/1q2sF_M277.pdb 1q2sF/struc/1q2sF_M230.pdb 1q2sF/struc/1q2sF_M164.pdb 1q2sF/struc/1q2sF_M130.pdb 1q2sF/struc/1q2sF_M496.pdb 1q2sF/struc/1q2sF_M178.pdb 1q2sF/struc/1q2sF_M99.pdb 1q2sF/struc/1q2sF_M86.pdb 1q2sF/struc/1q2sF_M179.pdb 1q2sF/struc/1q2sF_M58.pdb 1q2sF/struc/1q2sF_M158.pdb 1q2sF/struc/1q2sF_M69.pdb 1q2sF/struc/1q2sF_M29.pdb 1q2sF/struc/1q2sF_M274.pdb 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2nz4S/struc/2nz4S_M233.pdb 2nz4S/struc/2nz4S_M234.pdb 2nz4S/struc/2nz4S_M237.pdb 2nz4S/struc/2nz4S_M238.pdb 2nz4S/struc/2nz4S_M239.pdb 2nz4S/struc/2nz4S_M24.pdb 2nz4S/struc/2nz4S_M240.pdb 2nz4S/struc/2nz4S_M241.pdb 2nz4S/struc/2nz4S_M242.pdb 2nz4S/struc/2nz4S_M243.pdb 2nz4S/struc/2nz4S_M245.pdb 2nz4S/struc/2nz4S_M246.pdb 2nz4S/struc/2nz4S_M247.pdb 2nz4S/struc/2nz4S_M248.pdb 2nz4S/struc/2nz4S_M249.pdb 2nz4S/struc/2nz4S_M25.pdb 2nz4S/struc/2nz4S_M250.pdb 2nz4S/struc/2nz4S_M252.pdb 2nz4S/struc/2nz4S_M253.pdb 2nz4S/struc/2nz4S_M254.pdb 2nz4S/struc/2nz4S_M255.pdb 2nz4S/struc/2nz4S_M256.pdb 2nz4S/struc/2nz4S_M258.pdb 2nz4S/struc/2nz4S_M259.pdb 2nz4S/struc/2nz4S_M26.pdb 2nz4S/struc/2nz4S_M261.pdb 2nz4S/struc/2nz4S_M262.pdb 2nz4S/struc/2nz4S_M263.pdb 2nz4S/struc/2nz4S_M264.pdb 2nz4S/struc/2nz4S_M265.pdb 2nz4S/struc/2nz4S_M266.pdb 2nz4S/struc/2nz4S_M267.pdb 2nz4S/struc/2nz4S_M269.pdb 2nz4S/struc/2nz4S_M27.pdb 2nz4S/struc/2nz4S_M270.pdb 2nz4S/struc/2nz4S_M272.pdb 2nz4S/struc/2nz4S_M273.pdb 2nz4S/struc/2nz4S_M275.pdb 2nz4S/struc/2nz4S_M276.pdb 2nz4S/struc/2nz4S_M277.pdb 2nz4S/struc/2nz4S_M278.pdb 2nz4S/struc/2nz4S_M279.pdb 2nz4S/struc/2nz4S_M28.pdb 2nz4S/struc/2nz4S_M282.pdb 2nz4S/struc/2nz4S_M286.pdb 2nz4S/struc/2nz4S_M287.pdb 2nz4S/struc/2nz4S_M288.pdb 2nz4S/struc/2nz4S_M289.pdb 2nz4S/struc/2nz4S_M29.pdb 2nz4S/struc/2nz4S_M290.pdb 2nz4S/struc/2nz4S_M291.pdb 2nz4S/struc/2nz4S_M292.pdb 2nz4S/struc/2nz4S_M293.pdb 2nz4S/struc/2nz4S_M294.pdb 2nz4S/struc/2nz4S_M295.pdb 2nz4S/struc/2nz4S_M296.pdb 2nz4S/struc/2nz4S_M297.pdb 2nz4S/struc/2nz4S_M299.pdb 2nz4S/struc/2nz4S_M300.pdb 2nz4S/struc/2nz4S_M302.pdb 2nz4S/struc/2nz4S_M303.pdb 2nz4S/struc/2nz4S_M304.pdb 2nz4S/struc/2nz4S_M305.pdb 2nz4S/struc/2nz4S_M306.pdb 2nz4S/struc/2nz4S_M307.pdb 2nz4S/struc/2nz4S_M308.pdb 2nz4S/struc/2nz4S_M309.pdb 2nz4S/struc/2nz4S_M31.pdb 2nz4S/struc/2nz4S_M311.pdb 2nz4S/struc/2nz4S_M313.pdb 2nz4S/struc/2nz4S_M314.pdb 2nz4S/struc/2nz4S_M316.pdb 2nz4S/struc/2nz4S_M317.pdb 2nz4S/struc/2nz4S_M320.pdb 2nz4S/struc/2nz4S_M321.pdb 2nz4S/struc/2nz4S_M323.pdb 2nz4S/struc/2nz4S_M326.pdb 2nz4S/struc/2nz4S_M327.pdb 2nz4S/struc/2nz4S_M328.pdb 2nz4S/struc/2nz4S_M33.pdb 2nz4S/struc/2nz4S_M330.pdb 2nz4S/struc/2nz4S_M331.pdb 2nz4S/struc/2nz4S_M333.pdb 2nz4S/struc/2nz4S_M334.pdb 2nz4S/struc/2nz4S_M335.pdb 2nz4S/struc/2nz4S_M336.pdb 2nz4S/struc/2nz4S_M337.pdb 2nz4S/struc/2nz4S_M339.pdb 2nz4S/struc/2nz4S_M34.pdb 2nz4S/struc/2nz4S_M342.pdb 2nz4S/struc/2nz4S_M343.pdb 2nz4S/struc/2nz4S_M344.pdb 2nz4S/struc/2nz4S_M345.pdb 2nz4S/struc/2nz4S_M346.pdb 2nz4S/struc/2nz4S_M347.pdb 2nz4S/struc/2nz4S_M348.pdb 2nz4S/struc/2nz4S_M349.pdb 2nz4S/struc/2nz4S_M35.pdb 2nz4S/struc/2nz4S_M352.pdb 2nz4S/struc/2nz4S_M353.pdb 2nz4S/struc/2nz4S_M354.pdb 2nz4S/struc/2nz4S_M355.pdb 2nz4S/struc/2nz4S_M356.pdb 2nz4S/struc/2nz4S_M357.pdb 2nz4S/struc/2nz4S_M358.pdb 2nz4S/struc/2nz4S_M359.pdb 2nz4S/struc/2nz4S_M36.pdb 2nz4S/struc/2nz4S_M360.pdb 2nz4S/struc/2nz4S_M364.pdb 2nz4S/struc/2nz4S_M365.pdb 2nz4S/struc/2nz4S_M366.pdb 2nz4S/struc/2nz4S_M367.pdb 2nz4S/struc/2nz4S_M368.pdb 2nz4S/struc/2nz4S_M369.pdb 2nz4S/struc/2nz4S_M370.pdb 2nz4S/struc/2nz4S_M371.pdb 2nz4S/struc/2nz4S_M373.pdb 2nz4S/struc/2nz4S_M375.pdb 2nz4S/struc/2nz4S_M376.pdb 2nz4S/struc/2nz4S_M377.pdb 2nz4S/struc/2nz4S_M379.pdb 2nz4S/struc/2nz4S_M38.pdb 2nz4S/struc/2nz4S_M380.pdb 2nz4S/struc/2nz4S_M381.pdb 2nz4S/struc/2nz4S_M382.pdb 2nz4S/struc/2nz4S_M383.pdb 2nz4S/struc/2nz4S_M385.pdb 2nz4S/struc/2nz4S_M386.pdb 2nz4S/struc/2nz4S_M388.pdb 2nz4S/struc/2nz4S_M389.pdb 2nz4S/struc/2nz4S_M39.pdb 2nz4S/struc/2nz4S_M390.pdb 2nz4S/struc/2nz4S_M393.pdb 2nz4S/struc/2nz4S_M394.pdb 2nz4S/struc/2nz4S_M395.pdb 2nz4S/struc/2nz4S_M396.pdb 2nz4S/struc/2nz4S_M397.pdb 2nz4S/struc/2nz4S_M398.pdb 2nz4S/struc/2nz4S_M4.pdb 2nz4S/struc/2nz4S_M400.pdb 2nz4S/struc/2nz4S_M401.pdb 2nz4S/struc/2nz4S_M402.pdb 2nz4S/struc/2nz4S_M404.pdb 2nz4S/struc/2nz4S_M405.pdb 2nz4S/struc/2nz4S_M406.pdb 2nz4S/struc/2nz4S_M407.pdb 2nz4S/struc/2nz4S_M408.pdb 2nz4S/struc/2nz4S_M409.pdb 2nz4S/struc/2nz4S_M41.pdb 2nz4S/struc/2nz4S_M410.pdb 2nz4S/struc/2nz4S_M413.pdb 2nz4S/struc/2nz4S_M414.pdb 2nz4S/struc/2nz4S_M415.pdb 2nz4S/struc/2nz4S_M416.pdb 2nz4S/struc/2nz4S_M420.pdb 2nz4S/struc/2nz4S_M421.pdb 2nz4S/struc/2nz4S_M423.pdb 2nz4S/struc/2nz4S_M425.pdb 2nz4S/struc/2nz4S_M426.pdb 2nz4S/struc/2nz4S_M427.pdb 2nz4S/struc/2nz4S_M430.pdb 2nz4S/struc/2nz4S_M431.pdb 2nz4S/struc/2nz4S_M432.pdb 2nz4S/struc/2nz4S_M433.pdb 2nz4S/struc/2nz4S_M434.pdb 2nz4S/struc/2nz4S_M436.pdb 2nz4S/struc/2nz4S_M438.pdb 2nz4S/struc/2nz4S_M439.pdb 2nz4S/struc/2nz4S_M44.pdb 2nz4S/struc/2nz4S_M440.pdb 2nz4S/struc/2nz4S_M441.pdb 2nz4S/struc/2nz4S_M442.pdb 2nz4S/struc/2nz4S_M443.pdb 2nz4S/struc/2nz4S_M445.pdb 2nz4S/struc/2nz4S_M449.pdb 2nz4S/struc/2nz4S_M45.pdb 2nz4S/struc/2nz4S_M451.pdb 2nz4S/struc/2nz4S_M452.pdb 2nz4S/struc/2nz4S_M453.pdb 2nz4S/struc/2nz4S_M456.pdb 2nz4S/struc/2nz4S_M457.pdb 2nz4S/struc/2nz4S_M459.pdb 2nz4S/struc/2nz4S_M460.pdb 2nz4S/struc/2nz4S_M461.pdb 2nz4S/struc/2nz4S_M463.pdb 2nz4S/struc/2nz4S_M464.pdb 2nz4S/struc/2nz4S_M465.pdb 2nz4S/struc/2nz4S_M466.pdb 2nz4S/struc/2nz4S_M467.pdb 2nz4S/struc/2nz4S_M468.pdb 2nz4S/struc/2nz4S_M47.pdb 2nz4S/struc/2nz4S_M471.pdb 2nz4S/struc/2nz4S_M472.pdb 2nz4S/struc/2nz4S_M473.pdb 2nz4S/struc/2nz4S_M474.pdb 2nz4S/struc/2nz4S_M475.pdb 2nz4S/struc/2nz4S_M476.pdb 2nz4S/struc/2nz4S_M477.pdb 2nz4S/struc/2nz4S_M478.pdb 2nz4S/struc/2nz4S_M48.pdb 2nz4S/struc/2nz4S_M480.pdb 2nz4S/struc/2nz4S_M481.pdb 2nz4S/struc/2nz4S_M482.pdb 2nz4S/struc/2nz4S_M483.pdb 2nz4S/struc/2nz4S_M484.pdb 2nz4S/struc/2nz4S_M485.pdb 2nz4S/struc/2nz4S_M486.pdb 2nz4S/struc/2nz4S_M488.pdb 2nz4S/struc/2nz4S_M489.pdb 2nz4S/struc/2nz4S_M49.pdb 2nz4S/struc/2nz4S_M490.pdb 2nz4S/struc/2nz4S_M491.pdb 2nz4S/struc/2nz4S_M492.pdb 2nz4S/struc/2nz4S_M493.pdb 2nz4S/struc/2nz4S_M495.pdb 2nz4S/struc/2nz4S_M496.pdb 2nz4S/struc/2nz4S_M497.pdb 2nz4S/struc/2nz4S_M499.pdb 2nz4S/struc/2nz4S_M5.pdb 2nz4S/struc/2nz4S_M50.pdb 2nz4S/struc/2nz4S_M500.pdb 2nz4S/struc/2nz4S_M51.pdb 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437dA/struc/437dA_M121.pdb 437dA/struc/437dA_M122.pdb 437dA/struc/437dA_M129.pdb 437dA/struc/437dA_M131.pdb 437dA/struc/437dA_M135.pdb 437dA/struc/437dA_M137.pdb 437dA/struc/437dA_M138.pdb 437dA/struc/437dA_M14.pdb 437dA/struc/437dA_M141.pdb 437dA/struc/437dA_M145.pdb 437dA/struc/437dA_M148.pdb 437dA/struc/437dA_M156.pdb 437dA/struc/437dA_M157.pdb 437dA/struc/437dA_M17.pdb 437dA/struc/437dA_M173.pdb 437dA/struc/437dA_M176.pdb 437dA/struc/437dA_M180.pdb 437dA/struc/437dA_M186.pdb 437dA/struc/437dA_M189.pdb 437dA/struc/437dA_M190.pdb 437dA/struc/437dA_M194.pdb 437dA/struc/437dA_M196.pdb 437dA/struc/437dA_M2.pdb 437dA/struc/437dA_M207.pdb 437dA/struc/437dA_M21.pdb 437dA/struc/437dA_M214.pdb 437dA/struc/437dA_M217.pdb 437dA/struc/437dA_M219.pdb 437dA/struc/437dA_M220.pdb 437dA/struc/437dA_M226.pdb 437dA/struc/437dA_M227.pdb 437dA/struc/437dA_M228.pdb 437dA/struc/437dA_M230.pdb 437dA/struc/437dA_M232.pdb 437dA/struc/437dA_M236.pdb 437dA/struc/437dA_M240.pdb 437dA/struc/437dA_M242.pdb 437dA/struc/437dA_M244.pdb 437dA/struc/437dA_M246.pdb 437dA/struc/437dA_M249.pdb 437dA/struc/437dA_M25.pdb 437dA/struc/437dA_M251.pdb 437dA/struc/437dA_M252.pdb 437dA/struc/437dA_M255.pdb 437dA/struc/437dA_M257.pdb 437dA/struc/437dA_M260.pdb 437dA/struc/437dA_M263.pdb 437dA/struc/437dA_M266.pdb 437dA/struc/437dA_M268.pdb 437dA/struc/437dA_M270.pdb 437dA/struc/437dA_M271.pdb 437dA/struc/437dA_M272.pdb 437dA/struc/437dA_M273.pdb 437dA/struc/437dA_M276.pdb 437dA/struc/437dA_M281.pdb 437dA/struc/437dA_M283.pdb 437dA/struc/437dA_M299.pdb 437dA/struc/437dA_M30.pdb 437dA/struc/437dA_M301.pdb 437dA/struc/437dA_M305.pdb 437dA/struc/437dA_M311.pdb 437dA/struc/437dA_M315.pdb 437dA/struc/437dA_M316.pdb 437dA/struc/437dA_M317.pdb 437dA/struc/437dA_M318.pdb 437dA/struc/437dA_M319.pdb 437dA/struc/437dA_M326.pdb 437dA/struc/437dA_M328.pdb 437dA/struc/437dA_M329.pdb 437dA/struc/437dA_M335.pdb 437dA/struc/437dA_M339.pdb 437dA/struc/437dA_M342.pdb 437dA/struc/437dA_M348.pdb 437dA/struc/437dA_M350.pdb 437dA/struc/437dA_M353.pdb 437dA/struc/437dA_M357.pdb 437dA/struc/437dA_M358.pdb 437dA/struc/437dA_M360.pdb 437dA/struc/437dA_M363.pdb 437dA/struc/437dA_M364.pdb 437dA/struc/437dA_M366.pdb 437dA/struc/437dA_M37.pdb 437dA/struc/437dA_M375.pdb 437dA/struc/437dA_M376.pdb 437dA/struc/437dA_M379.pdb 437dA/struc/437dA_M387.pdb 437dA/struc/437dA_M388.pdb 437dA/struc/437dA_M393.pdb 437dA/struc/437dA_M398.pdb 437dA/struc/437dA_M399.pdb 437dA/struc/437dA_M4.pdb 437dA/struc/437dA_M402.pdb 437dA/struc/437dA_M403.pdb 437dA/struc/437dA_M404.pdb 437dA/struc/437dA_M405.pdb 437dA/struc/437dA_M413.pdb 437dA/struc/437dA_M42.pdb 437dA/struc/437dA_M426.pdb 437dA/struc/437dA_M428.pdb 437dA/struc/437dA_M43.pdb 437dA/struc/437dA_M433.pdb 437dA/struc/437dA_M434.pdb 437dA/struc/437dA_M435.pdb 437dA/struc/437dA_M441.pdb 437dA/struc/437dA_M446.pdb 437dA/struc/437dA_M45.pdb 437dA/struc/437dA_M453.pdb 437dA/struc/437dA_M454.pdb 437dA/struc/437dA_M456.pdb 437dA/struc/437dA_M458.pdb 437dA/struc/437dA_M46.pdb 437dA/struc/437dA_M460.pdb 437dA/struc/437dA_M462.pdb 437dA/struc/437dA_M466.pdb 437dA/struc/437dA_M470.pdb 437dA/struc/437dA_M478.pdb 437dA/struc/437dA_M484.pdb 437dA/struc/437dA_M489.pdb 437dA/struc/437dA_M491.pdb 437dA/struc/437dA_M492.pdb 437dA/struc/437dA_M499.pdb 437dA/struc/437dA_M51.pdb 437dA/struc/437dA_M55.pdb 437dA/struc/437dA_M57.pdb 437dA/struc/437dA_M59.pdb 437dA/struc/437dA_M79.pdb 437dA/struc/437dA_M8.pdb 437dA/struc/437dA_M86.pdb 437dA/struc/437dA_M88.pdb 437dA/struc/437dA_M89.pdb 437dA/struc/437dA_M96.pdb 437dA/struc/437dA_M98.pdb 6tnaA/struc/6tnaA_M100.pdb 6tnaA/struc/6tnaA_M101.pdb 6tnaA/struc/6tnaA_M102.pdb 6tnaA/struc/6tnaA_M103.pdb 6tnaA/struc/6tnaA_M104.pdb 6tnaA/struc/6tnaA_M106.pdb 6tnaA/struc/6tnaA_M107.pdb 6tnaA/struc/6tnaA_M110.pdb 6tnaA/struc/6tnaA_M112.pdb 6tnaA/struc/6tnaA_M113.pdb 6tnaA/struc/6tnaA_M115.pdb 6tnaA/struc/6tnaA_M116.pdb 6tnaA/struc/6tnaA_M117.pdb 6tnaA/struc/6tnaA_M120.pdb 6tnaA/struc/6tnaA_M121.pdb 6tnaA/struc/6tnaA_M122.pdb 6tnaA/struc/6tnaA_M124.pdb 6tnaA/struc/6tnaA_M125.pdb 6tnaA/struc/6tnaA_M128.pdb 6tnaA/struc/6tnaA_M130.pdb 6tnaA/struc/6tnaA_M131.pdb 6tnaA/struc/6tnaA_M132.pdb 6tnaA/struc/6tnaA_M133.pdb 6tnaA/struc/6tnaA_M134.pdb 6tnaA/struc/6tnaA_M135.pdb 6tnaA/struc/6tnaA_M137.pdb 6tnaA/struc/6tnaA_M138.pdb 6tnaA/struc/6tnaA_M143.pdb 6tnaA/struc/6tnaA_M146.pdb 6tnaA/struc/6tnaA_M149.pdb 6tnaA/struc/6tnaA_M15.pdb 6tnaA/struc/6tnaA_M153.pdb 6tnaA/struc/6tnaA_M155.pdb 6tnaA/struc/6tnaA_M156.pdb 6tnaA/struc/6tnaA_M157.pdb 6tnaA/struc/6tnaA_M158.pdb 6tnaA/struc/6tnaA_M16.pdb 6tnaA/struc/6tnaA_M161.pdb 6tnaA/struc/6tnaA_M162.pdb 6tnaA/struc/6tnaA_M164.pdb 6tnaA/struc/6tnaA_M166.pdb 6tnaA/struc/6tnaA_M168.pdb 6tnaA/struc/6tnaA_M17.pdb 6tnaA/struc/6tnaA_M170.pdb 6tnaA/struc/6tnaA_M171.pdb 6tnaA/struc/6tnaA_M172.pdb 6tnaA/struc/6tnaA_M173.pdb 6tnaA/struc/6tnaA_M174.pdb 6tnaA/struc/6tnaA_M176.pdb 6tnaA/struc/6tnaA_M177.pdb 6tnaA/struc/6tnaA_M178.pdb 6tnaA/struc/6tnaA_M179.pdb 6tnaA/struc/6tnaA_M180.pdb 6tnaA/struc/6tnaA_M181.pdb 6tnaA/struc/6tnaA_M183.pdb 6tnaA/struc/6tnaA_M184.pdb 6tnaA/struc/6tnaA_M185.pdb 6tnaA/struc/6tnaA_M186.pdb 6tnaA/struc/6tnaA_M187.pdb 6tnaA/struc/6tnaA_M189.pdb 6tnaA/struc/6tnaA_M19.pdb 6tnaA/struc/6tnaA_M190.pdb 6tnaA/struc/6tnaA_M192.pdb 6tnaA/struc/6tnaA_M193.pdb 6tnaA/struc/6tnaA_M194.pdb 6tnaA/struc/6tnaA_M196.pdb 6tnaA/struc/6tnaA_M199.pdb 6tnaA/struc/6tnaA_M20.pdb 6tnaA/struc/6tnaA_M200.pdb 6tnaA/struc/6tnaA_M202.pdb 6tnaA/struc/6tnaA_M203.pdb 6tnaA/struc/6tnaA_M205.pdb 6tnaA/struc/6tnaA_M206.pdb 6tnaA/struc/6tnaA_M207.pdb 6tnaA/struc/6tnaA_M209.pdb 6tnaA/struc/6tnaA_M21.pdb 6tnaA/struc/6tnaA_M213.pdb 6tnaA/struc/6tnaA_M214.pdb 6tnaA/struc/6tnaA_M215.pdb 6tnaA/struc/6tnaA_M216.pdb 6tnaA/struc/6tnaA_M218.pdb 6tnaA/struc/6tnaA_M22.pdb 6tnaA/struc/6tnaA_M220.pdb 6tnaA/struc/6tnaA_M223.pdb 6tnaA/struc/6tnaA_M224.pdb 6tnaA/struc/6tnaA_M225.pdb 6tnaA/struc/6tnaA_M226.pdb 6tnaA/struc/6tnaA_M228.pdb 6tnaA/struc/6tnaA_M229.pdb 6tnaA/struc/6tnaA_M231.pdb 6tnaA/struc/6tnaA_M232.pdb 6tnaA/struc/6tnaA_M233.pdb 6tnaA/struc/6tnaA_M235.pdb 6tnaA/struc/6tnaA_M236.pdb 6tnaA/struc/6tnaA_M237.pdb 6tnaA/struc/6tnaA_M238.pdb 6tnaA/struc/6tnaA_M239.pdb 6tnaA/struc/6tnaA_M24.pdb 6tnaA/struc/6tnaA_M240.pdb 6tnaA/struc/6tnaA_M241.pdb 6tnaA/struc/6tnaA_M242.pdb 6tnaA/struc/6tnaA_M243.pdb 6tnaA/struc/6tnaA_M244.pdb 6tnaA/struc/6tnaA_M245.pdb 6tnaA/struc/6tnaA_M247.pdb 6tnaA/struc/6tnaA_M249.pdb 6tnaA/struc/6tnaA_M250.pdb 6tnaA/struc/6tnaA_M252.pdb 6tnaA/struc/6tnaA_M253.pdb 6tnaA/struc/6tnaA_M254.pdb 6tnaA/struc/6tnaA_M255.pdb 6tnaA/struc/6tnaA_M256.pdb 6tnaA/struc/6tnaA_M257.pdb 6tnaA/struc/6tnaA_M259.pdb 6tnaA/struc/6tnaA_M260.pdb 6tnaA/struc/6tnaA_M261.pdb 6tnaA/struc/6tnaA_M262.pdb 6tnaA/struc/6tnaA_M265.pdb 6tnaA/struc/6tnaA_M266.pdb 6tnaA/struc/6tnaA_M269.pdb 6tnaA/struc/6tnaA_M273.pdb 6tnaA/struc/6tnaA_M274.pdb 6tnaA/struc/6tnaA_M275.pdb 6tnaA/struc/6tnaA_M277.pdb 6tnaA/struc/6tnaA_M279.pdb 6tnaA/struc/6tnaA_M28.pdb 6tnaA/struc/6tnaA_M281.pdb 6tnaA/struc/6tnaA_M283.pdb 6tnaA/struc/6tnaA_M284.pdb 6tnaA/struc/6tnaA_M285.pdb 6tnaA/struc/6tnaA_M286.pdb 6tnaA/struc/6tnaA_M287.pdb 6tnaA/struc/6tnaA_M288.pdb 6tnaA/struc/6tnaA_M289.pdb 6tnaA/struc/6tnaA_M29.pdb 6tnaA/struc/6tnaA_M290.pdb 6tnaA/struc/6tnaA_M291.pdb 6tnaA/struc/6tnaA_M293.pdb 6tnaA/struc/6tnaA_M294.pdb 6tnaA/struc/6tnaA_M295.pdb 6tnaA/struc/6tnaA_M296.pdb 6tnaA/struc/6tnaA_M298.pdb 6tnaA/struc/6tnaA_M3.pdb 6tnaA/struc/6tnaA_M300.pdb 6tnaA/struc/6tnaA_M301.pdb 6tnaA/struc/6tnaA_M302.pdb 6tnaA/struc/6tnaA_M304.pdb 6tnaA/struc/6tnaA_M305.pdb 6tnaA/struc/6tnaA_M306.pdb 6tnaA/struc/6tnaA_M307.pdb 6tnaA/struc/6tnaA_M308.pdb 6tnaA/struc/6tnaA_M309.pdb 6tnaA/struc/6tnaA_M31.pdb 6tnaA/struc/6tnaA_M310.pdb 6tnaA/struc/6tnaA_M312.pdb 6tnaA/struc/6tnaA_M315.pdb 6tnaA/struc/6tnaA_M316.pdb 6tnaA/struc/6tnaA_M317.pdb 6tnaA/struc/6tnaA_M318.pdb 6tnaA/struc/6tnaA_M32.pdb 6tnaA/struc/6tnaA_M322.pdb 6tnaA/struc/6tnaA_M324.pdb 6tnaA/struc/6tnaA_M326.pdb 6tnaA/struc/6tnaA_M327.pdb 6tnaA/struc/6tnaA_M329.pdb 6tnaA/struc/6tnaA_M33.pdb 6tnaA/struc/6tnaA_M330.pdb 6tnaA/struc/6tnaA_M331.pdb 6tnaA/struc/6tnaA_M332.pdb 6tnaA/struc/6tnaA_M334.pdb 6tnaA/struc/6tnaA_M337.pdb 6tnaA/struc/6tnaA_M338.pdb 6tnaA/struc/6tnaA_M339.pdb 6tnaA/struc/6tnaA_M34.pdb 6tnaA/struc/6tnaA_M340.pdb 6tnaA/struc/6tnaA_M341.pdb 6tnaA/struc/6tnaA_M342.pdb 6tnaA/struc/6tnaA_M344.pdb 6tnaA/struc/6tnaA_M347.pdb 6tnaA/struc/6tnaA_M349.pdb 6tnaA/struc/6tnaA_M35.pdb 6tnaA/struc/6tnaA_M351.pdb 6tnaA/struc/6tnaA_M352.pdb 6tnaA/struc/6tnaA_M353.pdb 6tnaA/struc/6tnaA_M354.pdb 6tnaA/struc/6tnaA_M355.pdb 6tnaA/struc/6tnaA_M357.pdb 6tnaA/struc/6tnaA_M358.pdb 6tnaA/struc/6tnaA_M360.pdb 6tnaA/struc/6tnaA_M362.pdb 6tnaA/struc/6tnaA_M363.pdb 6tnaA/struc/6tnaA_M364.pdb 6tnaA/struc/6tnaA_M365.pdb 6tnaA/struc/6tnaA_M367.pdb 6tnaA/struc/6tnaA_M368.pdb 6tnaA/struc/6tnaA_M370.pdb 6tnaA/struc/6tnaA_M371.pdb 6tnaA/struc/6tnaA_M372.pdb 6tnaA/struc/6tnaA_M376.pdb 6tnaA/struc/6tnaA_M379.pdb 6tnaA/struc/6tnaA_M38.pdb 6tnaA/struc/6tnaA_M380.pdb 6tnaA/struc/6tnaA_M382.pdb 6tnaA/struc/6tnaA_M383.pdb 6tnaA/struc/6tnaA_M386.pdb 6tnaA/struc/6tnaA_M387.pdb 6tnaA/struc/6tnaA_M388.pdb 6tnaA/struc/6tnaA_M390.pdb 6tnaA/struc/6tnaA_M392.pdb 6tnaA/struc/6tnaA_M393.pdb 6tnaA/struc/6tnaA_M394.pdb 6tnaA/struc/6tnaA_M395.pdb 6tnaA/struc/6tnaA_M397.pdb 6tnaA/struc/6tnaA_M398.pdb 6tnaA/struc/6tnaA_M40.pdb 6tnaA/struc/6tnaA_M401.pdb 6tnaA/struc/6tnaA_M402.pdb 6tnaA/struc/6tnaA_M403.pdb 6tnaA/struc/6tnaA_M405.pdb 6tnaA/struc/6tnaA_M406.pdb 6tnaA/struc/6tnaA_M408.pdb 6tnaA/struc/6tnaA_M409.pdb 6tnaA/struc/6tnaA_M411.pdb 6tnaA/struc/6tnaA_M412.pdb 6tnaA/struc/6tnaA_M415.pdb 6tnaA/struc/6tnaA_M416.pdb 6tnaA/struc/6tnaA_M417.pdb 6tnaA/struc/6tnaA_M418.pdb 6tnaA/struc/6tnaA_M419.pdb 6tnaA/struc/6tnaA_M42.pdb 6tnaA/struc/6tnaA_M421.pdb 6tnaA/struc/6tnaA_M423.pdb 6tnaA/struc/6tnaA_M424.pdb 6tnaA/struc/6tnaA_M425.pdb 6tnaA/struc/6tnaA_M428.pdb 6tnaA/struc/6tnaA_M429.pdb 6tnaA/struc/6tnaA_M43.pdb 6tnaA/struc/6tnaA_M431.pdb 6tnaA/struc/6tnaA_M432.pdb 6tnaA/struc/6tnaA_M433.pdb 6tnaA/struc/6tnaA_M434.pdb 6tnaA/struc/6tnaA_M435.pdb 6tnaA/struc/6tnaA_M436.pdb 6tnaA/struc/6tnaA_M437.pdb 6tnaA/struc/6tnaA_M44.pdb 6tnaA/struc/6tnaA_M441.pdb 6tnaA/struc/6tnaA_M442.pdb 6tnaA/struc/6tnaA_M445.pdb 6tnaA/struc/6tnaA_M447.pdb 6tnaA/struc/6tnaA_M449.pdb 6tnaA/struc/6tnaA_M45.pdb 6tnaA/struc/6tnaA_M452.pdb 6tnaA/struc/6tnaA_M454.pdb 6tnaA/struc/6tnaA_M455.pdb 6tnaA/struc/6tnaA_M456.pdb 6tnaA/struc/6tnaA_M459.pdb 6tnaA/struc/6tnaA_M46.pdb 6tnaA/struc/6tnaA_M460.pdb 6tnaA/struc/6tnaA_M461.pdb 6tnaA/struc/6tnaA_M463.pdb 6tnaA/struc/6tnaA_M464.pdb 6tnaA/struc/6tnaA_M466.pdb 6tnaA/struc/6tnaA_M467.pdb 6tnaA/struc/6tnaA_M468.pdb 6tnaA/struc/6tnaA_M469.pdb 6tnaA/struc/6tnaA_M47.pdb 6tnaA/struc/6tnaA_M471.pdb 6tnaA/struc/6tnaA_M472.pdb 6tnaA/struc/6tnaA_M473.pdb 6tnaA/struc/6tnaA_M474.pdb 6tnaA/struc/6tnaA_M475.pdb 6tnaA/struc/6tnaA_M476.pdb 6tnaA/struc/6tnaA_M477.pdb 6tnaA/struc/6tnaA_M479.pdb 6tnaA/struc/6tnaA_M48.pdb 6tnaA/struc/6tnaA_M481.pdb 6tnaA/struc/6tnaA_M482.pdb 6tnaA/struc/6tnaA_M483.pdb 6tnaA/struc/6tnaA_M484.pdb 6tnaA/struc/6tnaA_M485.pdb 6tnaA/struc/6tnaA_M486.pdb 6tnaA/struc/6tnaA_M487.pdb 6tnaA/struc/6tnaA_M488.pdb 6tnaA/struc/6tnaA_M490.pdb 6tnaA/struc/6tnaA_M491.pdb 6tnaA/struc/6tnaA_M492.pdb 6tnaA/struc/6tnaA_M493.pdb 6tnaA/struc/6tnaA_M494.pdb 6tnaA/struc/6tnaA_M495.pdb 6tnaA/struc/6tnaA_M497.pdb 6tnaA/struc/6tnaA_M5.pdb 6tnaA/struc/6tnaA_M50.pdb 6tnaA/struc/6tnaA_M52.pdb 6tnaA/struc/6tnaA_M53.pdb 6tnaA/struc/6tnaA_M54.pdb 6tnaA/struc/6tnaA_M57.pdb 6tnaA/struc/6tnaA_M62.pdb 6tnaA/struc/6tnaA_M63.pdb 6tnaA/struc/6tnaA_M66.pdb 6tnaA/struc/6tnaA_M67.pdb 6tnaA/struc/6tnaA_M68.pdb 6tnaA/struc/6tnaA_M69.pdb 6tnaA/struc/6tnaA_M7.pdb 6tnaA/struc/6tnaA_M70.pdb 6tnaA/struc/6tnaA_M72.pdb 6tnaA/struc/6tnaA_M73.pdb 6tnaA/struc/6tnaA_M75.pdb 6tnaA/struc/6tnaA_M76.pdb 6tnaA/struc/6tnaA_M77.pdb 6tnaA/struc/6tnaA_M79.pdb 6tnaA/struc/6tnaA_M82.pdb 6tnaA/struc/6tnaA_M83.pdb 6tnaA/struc/6tnaA_M84.pdb 6tnaA/struc/6tnaA_M86.pdb 6tnaA/struc/6tnaA_M89.pdb 6tnaA/struc/6tnaA_M9.pdb 6tnaA/struc/6tnaA_M90.pdb 6tnaA/struc/6tnaA_M92.pdb 6tnaA/struc/6tnaA_M93.pdb 6tnaA/struc/6tnaA_M94.pdb 6tnaA/struc/6tnaA_M95.pdb 6tnaA/struc/6tnaA_M96.pdb 6tnaA/struc/6tnaA_M97.pdb 6tnaA/struc/6tnaA_M99.pdb diff --git a/rna_tools/tools/automatix/pdb_list.txt b/rna_tools/tools/automatix/pdb_list.txt new file mode 100644 index 000000000..4118d156a --- /dev/null +++ b/rna_tools/tools/automatix/pdb_list.txt @@ -0,0 +1 @@ +3f1hB/struc/3f1hB_M204.pdb 3f1hB/struc/3f1hB_M425.pdb 3f1hB/struc/3f1hB_M404.pdb 3f1hB/struc/3f1hB_M330.pdb 3f1hB/struc/3f1hB_M57.pdb 3f1hB/struc/3f1hB_M337.pdb 3f1hB/struc/3f1hB_M217.pdb 3f1hB/struc/3f1hB_M213.pdb 3f1hB/struc/3f1hB_M141.pdb 3f1hB/struc/3f1hB_M380.pdb 3f1hB/struc/3f1hB_M143.pdb 3f1hB/struc/3f1hB_M465.pdb 3f1hB/struc/3f1hB_M48.pdb 3f1hB/struc/3f1hB_M78.pdb 3f1hB/struc/3f1hB_M500.pdb 3f1hB/struc/3f1hB_M450.pdb 3f1hB/struc/3f1hB_M384.pdb 3f1hB/struc/3f1hB_M16.pdb 3f1hB/struc/3f1hB_M403.pdb 3f1hB/struc/3f1hB_M198.pdb 3f1hB/struc/3f1hB_M87.pdb 3f1hB/struc/3f1hB_M287.pdb 3f1hB/struc/3f1hB_M463.pdb 3f1hB/struc/3f1hB_M372.pdb 3f1hB/struc/3f1hB_M304.pdb 3f1hB/struc/3f1hB_M441.pdb 3f1hB/struc/3f1hB_M260.pdb 3f1hB/struc/3f1hB_M432.pdb 3f1hB/struc/3f1hB_M180.pdb 3f1hB/struc/3f1hB_M378.pdb 3f1hB/struc/3f1hB_M274.pdb 3f1hB/struc/3f1hB_M479.pdb 3f1hB/struc/3f1hB_M70.pdb 3f1hB/struc/3f1hB_M438.pdb 3f1hB/struc/3f1hB_M245.pdb 3f1hB/struc/3f1hB_M448.pdb 3f1hB/struc/3f1hB_M409.pdb 3f1hB/struc/3f1hB_M12.pdb 3f1hB/struc/3f1hB_M151.pdb 3f1hB/struc/3f1hB_M110.pdb 3f1hB/struc/3f1hB_M185.pdb 3f1hB/struc/3f1hB_M257.pdb 3f1hB/struc/3f1hB_M435.pdb 3f1hB/struc/3f1hB_M246.pdb 3f1hB/struc/3f1hB_M219.pdb 3f1hB/struc/3f1hB_M81.pdb 3f1hB/struc/3f1hB_M208.pdb 3f1hB/struc/3f1hB_M389.pdb 3f1hB/struc/3f1hB_M363.pdb 3f1hB/struc/3f1hB_M440.pdb 3f1hB/struc/3f1hB_M117.pdb 3f1hB/struc/3f1hB_M63.pdb 3f1hB/struc/3f1hB_M2.pdb 3f1hB/struc/3f1hB_M360.pdb 3f1hB/struc/3f1hB_M431.pdb 3f1hB/struc/3f1hB_M452.pdb 3f1hB/struc/3f1hB_M353.pdb 3f1hB/struc/3f1hB_M224.pdb 3f1hB/struc/3f1hB_M340.pdb 3f1hB/struc/3f1hB_M135.pdb 3f1hB/struc/3f1hB_M228.pdb 3f1hB/struc/3f1hB_M174.pdb 3f1hB/struc/3f1hB_M152.pdb 3f1hB/struc/3f1hB_M216.pdb 3f1hB/struc/3f1hB_M49.pdb 3f1hB/struc/3f1hB_M284.pdb 3f1hB/struc/3f1hB_M273.pdb 3f1hB/struc/3f1hB_M328.pdb 3f1hB/struc/3f1hB_M475.pdb 3f1hB/struc/3f1hB_M104.pdb 3f1hB/struc/3f1hB_M53.pdb 3f1hB/struc/3f1hB_M227.pdb 3f1hB/struc/3f1hB_M173.pdb 3f1hB/struc/3f1hB_M329.pdb 3f1hB/struc/3f1hB_M58.pdb 3f1hB/struc/3f1hB_M83.pdb 3f1hB/struc/3f1hB_M7.pdb 3f1hB/struc/3f1hB_M418.pdb 3f1hB/struc/3f1hB_M331.pdb 3f1hB/struc/3f1hB_M415.pdb 3f1hB/struc/3f1hB_M39.pdb 3f1hB/struc/3f1hB_M60.pdb 3f1hB/struc/3f1hB_M412.pdb 3f1hB/struc/3f1hB_M9.pdb 3f1hB/struc/3f1hB_M458.pdb 3f1hB/struc/3f1hB_M294.pdb 3f1hB/struc/3f1hB_M453.pdb 3f1hB/struc/3f1hB_M168.pdb 3f1hB/struc/3f1hB_M147.pdb 3f1hB/struc/3f1hB_M237.pdb 3f1hB/struc/3f1hB_M207.pdb 3f1hB/struc/3f1hB_M390.pdb 3f1hB/struc/3f1hB_M232.pdb 3f1hB/struc/3f1hB_M200.pdb 3f1hB/struc/3f1hB_M126.pdb 3f1hB/struc/3f1hB_M121.pdb 3f1hB/struc/3f1hB_M343.pdb 3f1hB/struc/3f1hB_M408.pdb 3f1hB/struc/3f1hB_M93.pdb 3f1hB/struc/3f1hB_M221.pdb 3f1hB/struc/3f1hB_M347.pdb 3f1hB/struc/3f1hB_M206.pdb 3f1hB/struc/3f1hB_M280.pdb 3f1hB/struc/3f1hB_M146.pdb 3f1hB/struc/3f1hB_M128.pdb 3f1hB/struc/3f1hB_M267.pdb 3f1hB/struc/3f1hB_M188.pdb 3f1hB/struc/3f1hB_M398.pdb 3f1hB/struc/3f1hB_M103.pdb 3f1hB/struc/3f1hB_M97.pdb 3f1hB/struc/3f1hB_M332.pdb 3f1hB/struc/3f1hB_M222.pdb 3f1hB/struc/3f1hB_M410.pdb 3f1hB/struc/3f1hB_M249.pdb 3f1hB/struc/3f1hB_M113.pdb 3f1hB/struc/3f1hB_M424.pdb 3f1hB/struc/3f1hB_M88.pdb 3f1hB/struc/3f1hB_M127.pdb 3f1hB/struc/3f1hB_M120.pdb 3f1hB/struc/3f1hB_M129.pdb 3f1hB/struc/3f1hB_M239.pdb 3f1hB/struc/3f1hB_M29.pdb 3f1hB/struc/3f1hB_M32.pdb 3f1hB/struc/3f1hB_M169.pdb 3f1hB/struc/3f1hB_M405.pdb 3f1hB/struc/3f1hB_M381.pdb 3f1hB/struc/3f1hB_M47.pdb 3f1hB/struc/3f1hB_M84.pdb 3f1hB/struc/3f1hB_M350.pdb 3f1hB/struc/3f1hB_M262.pdb 3f1hB/struc/3f1hB_M357.pdb 3f1hB/struc/3f1hB_M489.pdb 3f1hB/struc/3f1hB_M485.pdb 3f1hB/struc/3f1hB_M191.pdb 3f1hB/struc/3f1hB_M429.pdb 3f1hB/struc/3f1hB_M44.pdb 3f1hB/struc/3f1hB_M189.pdb 3f1hB/struc/3f1hB_M85.pdb 3f1hB/struc/3f1hB_M125.pdb 3f1hB/struc/3f1hB_M20.pdb 3f1hB/struc/3f1hB_M214.pdb 3f1hB/struc/3f1hB_M5.pdb 3f1hB/struc/3f1hB_M278.pdb 3f1hB/struc/3f1hB_M469.pdb 3f1hB/struc/3f1hB_M355.pdb 3f1hB/struc/3f1hB_M478.pdb 3f1hB/struc/3f1hB_M321.pdb 3f1hB/struc/3f1hB_M323.pdb 3f1hB/struc/3f1hB_M423.pdb 3f1hB/struc/3f1hB_M183.pdb 3f1hB/struc/3f1hB_M165.pdb 3f1hB/struc/3f1hB_M449.pdb 3f1hB/struc/3f1hB_M96.pdb 3f1hB/struc/3f1hB_M244.pdb 3f1hB/struc/3f1hB_M307.pdb 3f1hB/struc/3f1hB_M211.pdb 3f1hB/struc/3f1hB_M266.pdb 3f1hB/struc/3f1hB_M496.pdb 3f1hB/struc/3f1hB_M338.pdb 3f1hB/struc/3f1hB_M349.pdb 3f1hB/struc/3f1hB_M133.pdb 3f1hB/struc/3f1hB_M498.pdb 3f1hB/struc/3f1hB_M252.pdb 3f1hB/struc/3f1hB_M137.pdb 3f1hB/struc/3f1hB_M250.pdb 3f1hB/struc/3f1hB_M140.pdb 3f1hB/struc/3f1hB_M215.pdb 3f1hB/struc/3f1hB_M172.pdb 3f1hB/struc/3f1hB_M112.pdb 3f1hB/struc/3f1hB_M290.pdb 3f1hB/struc/3f1hB_M40.pdb 3f1hB/struc/3f1hB_M41.pdb 3f1hB/struc/3f1hB_M36.pdb 3f1hB/struc/3f1hB_M43.pdb 3f1hB/struc/3f1hB_M354.pdb 3f1hB/struc/3f1hB_M317.pdb 3f1hB/struc/3f1hB_M383.pdb 3f1hB/struc/3f1hB_M263.pdb 3f1hB/struc/3f1hB_M437.pdb 3f1hB/struc/3f1hB_M241.pdb 3f1hB/struc/3f1hB_M495.pdb 3f1hB/struc/3f1hB_M138.pdb 3f1hB/struc/3f1hB_M171.pdb 3f1hB/struc/3f1hB_M359.pdb 3f1hB/struc/3f1hB_M226.pdb 3f1hB/struc/3f1hB_M130.pdb 3f1hB/struc/3f1hB_M300.pdb 3f1hB/struc/3f1hB_M92.pdb 3f1hB/struc/3f1hB_M167.pdb 3f1hB/struc/3f1hB_M361.pdb 3f1hB/struc/3f1hB_M46.pdb 3f1hB/struc/3f1hB_M101.pdb 3f1hB/struc/3f1hB_M480.pdb 3f1hB/struc/3f1hB_M474.pdb 3f1hB/struc/3f1hB_M160.pdb 3f1hB/struc/3f1hB_M392.pdb 3f1hB/struc/3f1hB_M439.pdb 3f1hB/struc/3f1hB_M35.pdb 3f1hB/struc/3f1hB_M72.pdb 3f1hB/struc/3f1hB_M301.pdb 3f1hB/struc/3f1hB_M385.pdb 3f1hB/struc/3f1hB_M24.pdb 3f1hB/struc/3f1hB_M417.pdb 3f1hB/struc/3f1hB_M377.pdb 3f1hB/struc/3f1hB_M358.pdb 3f1hB/struc/3f1hB_M111.pdb 3f1hB/struc/3f1hB_M352.pdb 3f1hB/struc/3f1hB_M277.pdb 3f1hB/struc/3f1hB_M25.pdb 3f1hB/struc/3f1hB_M282.pdb 3f1hB/struc/3f1hB_M132.pdb 3f1hB/struc/3f1hB_M443.pdb 3f1hB/struc/3f1hB_M163.pdb 3f1hB/struc/3f1hB_M145.pdb 3f1hB/struc/3f1hB_M270.pdb 3f1hB/struc/3f1hB_M445.pdb 3f1hB/struc/3f1hB_M394.pdb 3f1hB/struc/3f1hB_M155.pdb 3f1hB/struc/3f1hB_M460.pdb 3f1hB/struc/3f1hB_M316.pdb 3f1hB/struc/3f1hB_M324.pdb 3f1hB/struc/3f1hB_M238.pdb 3f1hB/struc/3f1hB_M364.pdb 3f1hB/struc/3f1hB_M86.pdb 3f1hB/struc/3f1hB_M65.pdb 3f1hB/struc/3f1hB_M447.pdb 3f1hB/struc/3f1hB_M422.pdb 3f1hB/struc/3f1hB_M258.pdb diff --git a/rna_tools/tools/automatix/pdb_list.txt~ b/rna_tools/tools/automatix/pdb_list.txt~ new file mode 100644 index 000000000..e9e3251d4 --- /dev/null +++ b/rna_tools/tools/automatix/pdb_list.txt~ @@ -0,0 +1 @@ +3f1hB/struc/3f1hB_M491.pdb 3f1hB/struc/3f1hB_M204.pdb 3f1hB/struc/3f1hB_M425.pdb 3f1hB/struc/3f1hB_M404.pdb 3f1hB/struc/3f1hB_M330.pdb 3f1hB/struc/3f1hB_M57.pdb 3f1hB/struc/3f1hB_M337.pdb 3f1hB/struc/3f1hB_M217.pdb 3f1hB/struc/3f1hB_M213.pdb 3f1hB/struc/3f1hB_M190.pdb 3f1hB/struc/3f1hB_M141.pdb 3f1hB/struc/3f1hB_M380.pdb 3f1hB/struc/3f1hB_M143.pdb 3f1hB/struc/3f1hB_M465.pdb 3f1hB/struc/3f1hB_M48.pdb 3f1hB/struc/3f1hB_M78.pdb 3f1hB/struc/3f1hB_M500.pdb 3f1hB/struc/3f1hB_M450.pdb 3f1hB/struc/3f1hB_M384.pdb 3f1hB/struc/3f1hB_M16.pdb 3f1hB/struc/3f1hB_M403.pdb 3f1hB/struc/3f1hB_M198.pdb 3f1hB/struc/3f1hB_M87.pdb 3f1hB/struc/3f1hB_M287.pdb 3f1hB/struc/3f1hB_M463.pdb 3f1hB/struc/3f1hB_M256.pdb 3f1hB/struc/3f1hB_M193.pdb 3f1hB/struc/3f1hB_M372.pdb 3f1hB/struc/3f1hB_M304.pdb 3f1hB/struc/3f1hB_M441.pdb 3f1hB/struc/3f1hB_M260.pdb 3f1hB/struc/3f1hB_M432.pdb 3f1hB/struc/3f1hB_M180.pdb 3f1hB/struc/3f1hB_M107.pdb 3f1hB/struc/3f1hB_M378.pdb 3f1hB/struc/3f1hB_M274.pdb 3f1hB/struc/3f1hB_M479.pdb 3f1hB/struc/3f1hB_M70.pdb 3f1hB/struc/3f1hB_M438.pdb 3f1hB/struc/3f1hB_M245.pdb 3f1hB/struc/3f1hB_M448.pdb 3f1hB/struc/3f1hB_M54.pdb 3f1hB/struc/3f1hB_M409.pdb 3f1hB/struc/3f1hB_M12.pdb 3f1hB/struc/3f1hB_M151.pdb 3f1hB/struc/3f1hB_M110.pdb 3f1hB/struc/3f1hB_M185.pdb 3f1hB/struc/3f1hB_M257.pdb 3f1hB/struc/3f1hB_M435.pdb 3f1hB/struc/3f1hB_M246.pdb 3f1hB/struc/3f1hB_M219.pdb 3f1hB/struc/3f1hB_M81.pdb 3f1hB/struc/3f1hB_M208.pdb 3f1hB/struc/3f1hB_M389.pdb 3f1hB/struc/3f1hB_M363.pdb 3f1hB/struc/3f1hB_M440.pdb 3f1hB/struc/3f1hB_M117.pdb 3f1hB/struc/3f1hB_M444.pdb 3f1hB/struc/3f1hB_M240.pdb 3f1hB/struc/3f1hB_M259.pdb 3f1hB/struc/3f1hB_M63.pdb 3f1hB/struc/3f1hB_M2.pdb 3f1hB/struc/3f1hB_M360.pdb 3f1hB/struc/3f1hB_M431.pdb 3f1hB/struc/3f1hB_M452.pdb 3f1hB/struc/3f1hB_M299.pdb 3f1hB/struc/3f1hB_M353.pdb 3f1hB/struc/3f1hB_M224.pdb 3f1hB/struc/3f1hB_M340.pdb 3f1hB/struc/3f1hB_M135.pdb 3f1hB/struc/3f1hB_M228.pdb 3f1hB/struc/3f1hB_M174.pdb 3f1hB/struc/3f1hB_M152.pdb 3f1hB/struc/3f1hB_M216.pdb 3f1hB/struc/3f1hB_M49.pdb 3f1hB/struc/3f1hB_M284.pdb 3f1hB/struc/3f1hB_M273.pdb 3f1hB/struc/3f1hB_M328.pdb 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1njp5/struc/1njp5_M390.pdb 1njp5/struc/1njp5_M28.pdb 1njp5/struc/1njp5_M404.pdb 1njp5/struc/1njp5_M273.pdb 1njp5/struc/1njp5_M321.pdb 1njp5/struc/1njp5_M223.pdb 1njp5/struc/1njp5_M443.pdb 1njp5/struc/1njp5_M34.pdb 1njp5/struc/1njp5_M500.pdb 1njp5/struc/1njp5_M465.pdb 1njp5/struc/1njp5_M355.pdb 1njp5/struc/1njp5_M164.pdb 1njp5/struc/1njp5_M111.pdb 1njp5/struc/1njp5_M166.pdb 1njp5/struc/1njp5_M499.pdb 1njp5/struc/1njp5_M10.pdb 1njp5/struc/1njp5_M57.pdb 1njp5/struc/1njp5_M153.pdb 1njp5/struc/1njp5_M313.pdb 1njp5/struc/1njp5_M474.pdb 1njp5/struc/1njp5_M144.pdb 1njp5/struc/1njp5_M11.pdb 1njp5/struc/1njp5_M351.pdb 1njp5/struc/1njp5_M199.pdb 1njp5/struc/1njp5_M216.pdb 1njp5/struc/1njp5_M331.pdb 1njp5/struc/1njp5_M103.pdb 1njp5/struc/1njp5_M346.pdb 1njp5/struc/1njp5_M315.pdb 1njp5/struc/1njp5_M407.pdb 1njp5/struc/1njp5_M7.pdb 1njp5/struc/1njp5_M246.pdb 1njp5/struc/1njp5_M193.pdb 1njp5/struc/1njp5_M85.pdb 1njp5/struc/1njp5_M438.pdb 1njp5/struc/1njp5_M432.pdb 1njp5/struc/1njp5_M27.pdb 1njp5/struc/1njp5_M334.pdb 1njp5/struc/1njp5_M403.pdb 1njp5/struc/1njp5_M269.pdb 1njp5/struc/1njp5_M89.pdb 1njp5/struc/1njp5_M217.pdb 1njp5/struc/1njp5_M173.pdb 1njp5/struc/1njp5_M425.pdb 1njp5/struc/1njp5_M279.pdb 1njp5/struc/1njp5_M268.pdb 1njp5/struc/1njp5_M102.pdb 1njp5/struc/1njp5_M374.pdb 1njp5/struc/1njp5_M304.pdb 1njp5/struc/1njp5_M368.pdb 1njp5/struc/1njp5_M127.pdb 1njp5/struc/1njp5_M385.pdb 1njp5/struc/1njp5_M46.pdb 1njp5/struc/1njp5_M218.pdb 1njp5/struc/1njp5_M31.pdb 1njp5/struc/1njp5_M257.pdb 1njp5/struc/1njp5_M3.pdb 1njp5/struc/1njp5_M431.pdb 1njp5/struc/1njp5_M13.pdb 1njp5/struc/1njp5_M263.pdb 1njp5/struc/1njp5_M340.pdb 1njp5/struc/1njp5_M301.pdb 1njp5/struc/1njp5_M72.pdb 1njp5/struc/1njp5_M280.pdb 1njp5/struc/1njp5_M358.pdb 1njp5/struc/1njp5_M18.pdb 1njp5/struc/1njp5_M240.pdb 1njp5/struc/1njp5_M220.pdb 1njp5/struc/1njp5_M215.pdb 1njp5/struc/1njp5_M69.pdb 1njp5/struc/1njp5_M130.pdb 1njp5/struc/1njp5_M423.pdb 1njp5/struc/1njp5_M175.pdb 1njp5/struc/1njp5_M33.pdb 1njp5/struc/1njp5_M405.pdb 1njp5/struc/1njp5_M233.pdb 1njp5/struc/1njp5_M21.pdb 1njp5/struc/1njp5_M308.pdb 1njp5/struc/1njp5_M62.pdb 1njp5/struc/1njp5_M453.pdb 1njp5/struc/1njp5_M286.pdb 1njp5/struc/1njp5_M434.pdb 1njp5/struc/1njp5_M371.pdb 1njp5/struc/1njp5_M124.pdb 1njp5/struc/1njp5_M44.pdb 1njp5/struc/1njp5_M36.pdb 1njp5/struc/1njp5_M409.pdb 1njp5/struc/1njp5_M270.pdb 1njp5/struc/1njp5_M81.pdb 1njp5/struc/1njp5_M260.pdb 1njp5/struc/1njp5_M187.pdb 1njp5/struc/1njp5_M4.pdb 1njp5/struc/1njp5_M185.pdb 1njp5/struc/1njp5_M162.pdb 1njp5/struc/1njp5_M464.pdb 1njp5/struc/1njp5_M370.pdb 1njp5/struc/1njp5_M64.pdb 1njp5/struc/1njp5_M458.pdb 1njp5/struc/1njp5_M55.pdb 1njp5/struc/1njp5_M35.pdb 1njp5/struc/1njp5_M22.pdb 1njp5/struc/1njp5_M281.pdb 1njp5/struc/1njp5_M421.pdb 1njp5/struc/1njp5_M288.pdb 1njp5/struc/1njp5_M427.pdb 1njp5/struc/1njp5_M6.pdb 1njp5/struc/1njp5_M364.pdb 1njp5/struc/1njp5_M299.pdb 1njp5/struc/1njp5_M398.pdb 1njp5/struc/1njp5_M112.pdb 1njp5/struc/1njp5_M24.pdb 1njp5/struc/1njp5_M121.pdb 1njp5/struc/1njp5_M440.pdb 1njp5/struc/1njp5_M491.pdb 1njp5/struc/1njp5_M9.pdb 1njp5/struc/1njp5_M157.pdb 1njp5/struc/1njp5_M325.pdb 1njp5/struc/1njp5_M401.pdb 1njp5/struc/1njp5_M151.pdb 1njp5/struc/1njp5_M352.pdb 1njp5/struc/1njp5_M61.pdb 1njp5/struc/1njp5_M232.pdb 1njp5/struc/1njp5_M136.pdb 1njp5/struc/1njp5_M460.pdb 1njp5/struc/1njp5_M77.pdb 1njp5/struc/1njp5_M252.pdb 1njp5/struc/1njp5_M360.pdb 1njp5/struc/1njp5_M462.pdb 1njp5/struc/1njp5_M411.pdb 1njp5/struc/1njp5_M181.pdb 1njp5/struc/1njp5_M347.pdb 1njp5/struc/1njp5_M413.pdb 1njp5/struc/1njp5_M487.pdb 1njp5/struc/1njp5_M376.pdb 1njp5/struc/1njp5_M439.pdb 1njp5/struc/1njp5_M489.pdb 1njp5/struc/1njp5_M245.pdb 1njp5/struc/1njp5_M101.pdb 1njp5/struc/1njp5_M382.pdb 1njp5/struc/1njp5_M475.pdb 1njp5/struc/1njp5_M498.pdb 1njp5/struc/1njp5_M129.pdb 1njp5/struc/1njp5_M393.pdb 1mfqA/struc/1mfqA_M109.pdb 1mfqA/struc/1mfqA_M136.pdb 1mfqA/struc/1mfqA_M294.pdb 1mfqA/struc/1mfqA_M256.pdb 1mfqA/struc/1mfqA_M147.pdb 1mfqA/struc/1mfqA_M238.pdb 1mfqA/struc/1mfqA_M85.pdb 1mfqA/struc/1mfqA_M26.pdb 1mfqA/struc/1mfqA_M326.pdb 1mfqA/struc/1mfqA_M337.pdb 1mfqA/struc/1mfqA_M481.pdb 1mfqA/struc/1mfqA_M453.pdb 2bh2D/struc/2bh2D_M325.pdb 2bh2D/struc/2bh2D_M210.pdb 2bh2D/struc/2bh2D_M139.pdb 2bh2D/struc/2bh2D_M47.pdb 2bh2D/struc/2bh2D_M329.pdb 2bh2D/struc/2bh2D_M500.pdb 2bh2D/struc/2bh2D_M402.pdb 2bh2D/struc/2bh2D_M493.pdb 2bh2D/struc/2bh2D_M86.pdb 2bh2D/struc/2bh2D_M202.pdb 2bh2D/struc/2bh2D_M480.pdb 2bh2D/struc/2bh2D_M447.pdb 2bh2D/struc/2bh2D_M454.pdb 2bh2D/struc/2bh2D_M465.pdb 2bh2D/struc/2bh2D_M439.pdb 2bh2D/struc/2bh2D_M357.pdb 2bh2D/struc/2bh2D_M236.pdb 2bh2D/struc/2bh2D_M165.pdb 2bh2D/struc/2bh2D_M331.pdb 2bh2D/struc/2bh2D_M50.pdb 2bh2D/struc/2bh2D_M473.pdb 2bh2D/struc/2bh2D_M51.pdb 2bh2D/struc/2bh2D_M306.pdb 2bh2D/struc/2bh2D_M406.pdb 2bh2D/struc/2bh2D_M438.pdb 2bh2D/struc/2bh2D_M65.pdb 2bh2D/struc/2bh2D_M18.pdb 2bh2D/struc/2bh2D_M267.pdb 2bh2D/struc/2bh2D_M92.pdb 2bh2D/struc/2bh2D_M125.pdb 2bh2D/struc/2bh2D_M159.pdb 2bh2D/struc/2bh2D_M294.pdb 2bh2D/struc/2bh2D_M374.pdb 2bh2D/struc/2bh2D_M196.pdb 2bh2D/struc/2bh2D_M155.pdb 2bh2D/struc/2bh2D_M41.pdb 2bh2D/struc/2bh2D_M182.pdb 2bh2D/struc/2bh2D_M348.pdb 2bh2D/struc/2bh2D_M477.pdb 2bh2D/struc/2bh2D_M411.pdb 2bh2D/struc/2bh2D_M293.pdb 2bh2D/struc/2bh2D_M376.pdb 2bh2D/struc/2bh2D_M5.pdb 2bh2D/struc/2bh2D_M207.pdb 2bh2D/struc/2bh2D_M244.pdb 2bh2D/struc/2bh2D_M310.pdb 2bh2D/struc/2bh2D_M186.pdb 2bh2D/struc/2bh2D_M273.pdb 2bh2D/struc/2bh2D_M225.pdb 2bh2D/struc/2bh2D_M302.pdb 2bh2D/struc/2bh2D_M233.pdb 2bh2D/struc/2bh2D_M372.pdb 2bh2D/struc/2bh2D_M282.pdb 2bh2D/struc/2bh2D_M26.pdb 2bh2D/struc/2bh2D_M71.pdb 2bh2D/struc/2bh2D_M478.pdb 2bh2D/struc/2bh2D_M393.pdb 2bh2D/struc/2bh2D_M79.pdb 2bh2D/struc/2bh2D_M7.pdb 2bh2D/struc/2bh2D_M452.pdb 2bh2D/struc/2bh2D_M362.pdb 2bh2D/struc/2bh2D_M102.pdb 2bh2D/struc/2bh2D_M171.pdb 2bh2D/struc/2bh2D_M63.pdb 2bh2D/struc/2bh2D_M390.pdb 2bh2D/struc/2bh2D_M491.pdb 2bh2D/struc/2bh2D_M420.pdb 2bh2D/struc/2bh2D_M463.pdb 2bh2D/struc/2bh2D_M460.pdb 2bh2D/struc/2bh2D_M55.pdb 2bh2D/struc/2bh2D_M285.pdb 2bh2D/struc/2bh2D_M116.pdb 2bh2D/struc/2bh2D_M163.pdb 2bh2D/struc/2bh2D_M400.pdb 2bh2D/struc/2bh2D_M335.pdb 2bh2D/struc/2bh2D_M333.pdb 2bh2D/struc/2bh2D_M89.pdb 2bh2D/struc/2bh2D_M490.pdb 2bh2D/struc/2bh2D_M132.pdb 2bh2D/struc/2bh2D_M278.pdb 2bh2D/struc/2bh2D_M489.pdb 2bh2D/struc/2bh2D_M35.pdb 2bh2D/struc/2bh2D_M268.pdb 2bh2D/struc/2bh2D_M20.pdb 2bh2D/struc/2bh2D_M361.pdb 2bh2D/struc/2bh2D_M8.pdb 2bh2D/struc/2bh2D_M119.pdb 2bh2D/struc/2bh2D_M482.pdb 2bh2D/struc/2bh2D_M269.pdb 2bh2D/struc/2bh2D_M428.pdb 2bh2D/struc/2bh2D_M138.pdb 2bh2D/struc/2bh2D_M265.pdb 2bh2D/struc/2bh2D_M347.pdb 2bh2D/struc/2bh2D_M45.pdb 2bh2D/struc/2bh2D_M421.pdb 2bh2D/struc/2bh2D_M15.pdb 2bh2D/struc/2bh2D_M468.pdb 2bh2D/struc/2bh2D_M105.pdb 2bh2D/struc/2bh2D_M425.pdb 2bh2D/struc/2bh2D_M97.pdb 2bh2D/struc/2bh2D_M75.pdb 2bh2D/struc/2bh2D_M219.pdb 2bh2D/struc/2bh2D_M368.pdb 2bh2D/struc/2bh2D_M17.pdb 2bh2D/struc/2bh2D_M322.pdb 2bh2D/struc/2bh2D_M204.pdb 2bh2D/struc/2bh2D_M156.pdb 2bh2D/struc/2bh2D_M100.pdb 2bh2D/struc/2bh2D_M261.pdb 2bh2D/struc/2bh2D_M375.pdb 2bh2D/struc/2bh2D_M435.pdb 2bh2D/struc/2bh2D_M399.pdb 2bh2D/struc/2bh2D_M137.pdb 2bh2D/struc/2bh2D_M461.pdb 2bh2D/struc/2bh2D_M341.pdb 2bh2D/struc/2bh2D_M458.pdb 2bh2D/struc/2bh2D_M318.pdb 2bh2D/struc/2bh2D_M436.pdb 2bh2D/struc/2bh2D_M433.pdb 2bh2D/struc/2bh2D_M237.pdb 2bh2D/struc/2bh2D_M427.pdb 2bh2D/struc/2bh2D_M279.pdb 2bh2D/struc/2bh2D_M37.pdb 2bh2D/struc/2bh2D_M54.pdb 2bh2D/struc/2bh2D_M197.pdb 2bh2D/struc/2bh2D_M1.pdb 2bh2D/struc/2bh2D_M432.pdb 2bh2D/struc/2bh2D_M153.pdb 2bh2D/struc/2bh2D_M115.pdb 2bh2D/struc/2bh2D_M350.pdb 2bh2D/struc/2bh2D_M147.pdb 2bh2D/struc/2bh2D_M83.pdb 2bh2D/struc/2bh2D_M211.pdb 2bh2D/struc/2bh2D_M475.pdb 2bh2D/struc/2bh2D_M78.pdb 2bh2D/struc/2bh2D_M392.pdb 2bh2D/struc/2bh2D_M443.pdb 2bh2D/struc/2bh2D_M476.pdb 2bh2D/struc/2bh2D_M192.pdb 2bh2D/struc/2bh2D_M367.pdb 2bh2D/struc/2bh2D_M177.pdb 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3f30X/struc/3f30X_M489.pdb 3f30X/struc/3f30X_M157.pdb 3f30X/struc/3f30X_M204.pdb 3f30X/struc/3f30X_M246.pdb 3f30X/struc/3f30X_M109.pdb 3f30X/struc/3f30X_M414.pdb 3f30X/struc/3f30X_M370.pdb 3f30X/struc/3f30X_M217.pdb 3f30X/struc/3f30X_M141.pdb 3f30X/struc/3f30X_M11.pdb 3f30X/struc/3f30X_M222.pdb 3f30X/struc/3f30X_M91.pdb 3f30X/struc/3f30X_M241.pdb 3f30X/struc/3f30X_M363.pdb 3f30X/struc/3f30X_M116.pdb 3f30X/struc/3f30X_M28.pdb 3f30X/struc/3f30X_M226.pdb 3f30X/struc/3f30X_M478.pdb 3f30X/struc/3f30X_M373.pdb 3f30X/struc/3f30X_M293.pdb 3f30X/struc/3f30X_M211.pdb 3f30X/struc/3f30X_M367.pdb 3f30X/struc/3f30X_M377.pdb 3f30X/struc/3f30X_M297.pdb 3f30X/struc/3f30X_M408.pdb 3f30X/struc/3f30X_M180.pdb 3f30X/struc/3f30X_M175.pdb 3f30X/struc/3f30X_M487.pdb 3f30X/struc/3f30X_M234.pdb 3f30X/struc/3f30X_M21.pdb 3f30X/struc/3f30X_M63.pdb 3f30X/struc/3f30X_M58.pdb 3f30X/struc/3f30X_M100.pdb 3f30X/struc/3f30X_M459.pdb 3f30X/struc/3f30X_M258.pdb 3f30X/struc/3f30X_M272.pdb 3f30X/struc/3f30X_M475.pdb 3f30X/struc/3f30X_M99.pdb 3f30X/struc/3f30X_M279.pdb 3f30X/struc/3f30X_M401.pdb 3f30X/struc/3f30X_M37.pdb 3f30X/struc/3f30X_M132.pdb 3f30X/struc/3f30X_M409.pdb 3f30X/struc/3f30X_M15.pdb 3f30X/struc/3f30X_M433.pdb 3f30X/struc/3f30X_M205.pdb 3f30X/struc/3f30X_M354.pdb 3f30X/struc/3f30X_M298.pdb 3f30X/struc/3f30X_M375.pdb 3f30X/struc/3f30X_M255.pdb 3f30X/struc/3f30X_M334.pdb 3f30X/struc/3f30X_M182.pdb 3f30X/struc/3f30X_M318.pdb 3f30X/struc/3f30X_M146.pdb 3f30X/struc/3f30X_M156.pdb 3f30X/struc/3f30X_M74.pdb 3f30X/struc/3f30X_M316.pdb 3f30X/struc/3f30X_M199.pdb 3f30X/struc/3f30X_M338.pdb 3f30X/struc/3f30X_M465.pdb 3f30X/struc/3f30X_M49.pdb 3f30X/struc/3f30X_M40.pdb 3f30X/struc/3f30X_M479.pdb 3f30X/struc/3f30X_M151.pdb 3f30X/struc/3f30X_M64.pdb 3f30X/struc/3f30X_M3.pdb 3f30X/struc/3f30X_M17.pdb 3f30X/struc/3f30X_M477.pdb 3f30X/struc/3f30X_M206.pdb 3f30X/struc/3f30X_M403.pdb 3f30X/struc/3f30X_M281.pdb 3f30X/struc/3f30X_M59.pdb 3f30X/struc/3f30X_M421.pdb 3f30X/struc/3f30X_M26.pdb 3f30X/struc/3f30X_M236.pdb 3f30X/struc/3f30X_M347.pdb 3f30X/struc/3f30X_M340.pdb 3f30X/struc/3f30X_M336.pdb 3f30X/struc/3f30X_M115.pdb 3f30X/struc/3f30X_M493.pdb 3f30X/struc/3f30X_M242.pdb 3f30X/struc/3f30X_M167.pdb 3f30X/struc/3f30X_M44.pdb 3f30X/struc/3f30X_M200.pdb 3f30X/struc/3f30X_M104.pdb 3f30X/struc/3f30X_M417.pdb 3f30X/struc/3f30X_M490.pdb 3f30X/struc/3f30X_M71.pdb 3f30X/struc/3f30X_M420.pdb 3f30X/struc/3f30X_M193.pdb 3f30X/struc/3f30X_M480.pdb 3f30X/struc/3f30X_M16.pdb 3f30X/struc/3f30X_M220.pdb 3f30X/struc/3f30X_M94.pdb 3f30X/struc/3f30X_M51.pdb 3f30X/struc/3f30X_M383.pdb 3f30X/struc/3f30X_M441.pdb 3f30X/struc/3f30X_M148.pdb 3f30X/struc/3f30X_M444.pdb 3f30X/struc/3f30X_M344.pdb 3f30X/struc/3f30X_M358.pdb 3f30X/struc/3f30X_M238.pdb 3f30X/struc/3f30X_M52.pdb 3f30X/struc/3f30X_M209.pdb 3f30X/struc/3f30X_M87.pdb 3f30X/struc/3f30X_M197.pdb 3f30X/struc/3f30X_M170.pdb 3f30X/struc/3f30X_M308.pdb 3f30X/struc/3f30X_M55.pdb 3f30X/struc/3f30X_M446.pdb 3f30X/struc/3f30X_M256.pdb 3f30X/struc/3f30X_M201.pdb 3f30X/struc/3f30X_M461.pdb 3f30X/struc/3f30X_M430.pdb 3f30X/struc/3f30X_M102.pdb 3f30X/struc/3f30X_M482.pdb 3f30X/struc/3f30X_M346.pdb 3f30X/struc/3f30X_M176.pdb 3f30X/struc/3f30X_M240.pdb 3f30X/struc/3f30X_M419.pdb 3f30X/struc/3f30X_M107.pdb 3f30X/struc/3f30X_M355.pdb 3f30X/struc/3f30X_M285.pdb 3f30X/struc/3f30X_M353.pdb 3f30X/struc/3f30X_M208.pdb 3f30X/struc/3f30X_M2.pdb 3f30X/struc/3f30X_M423.pdb 3f30X/struc/3f30X_M496.pdb 3f30X/struc/3f30X_M337.pdb 3f30X/struc/3f30X_M447.pdb 3f30X/struc/3f30X_M470.pdb 3f30X/struc/3f30X_M312.pdb 3f30X/struc/3f30X_M491.pdb 3f30X/struc/3f30X_M418.pdb 3f30X/struc/3f30X_M202.pdb 3f30X/struc/3f30X_M349.pdb 3f30X/struc/3f30X_M300.pdb 3f30X/struc/3f30X_M57.pdb 3f30X/struc/3f30X_M315.pdb 3f30X/struc/3f30X_M125.pdb 3f30X/struc/3f30X_M145.pdb 3f30X/struc/3f30X_M292.pdb 3f30X/struc/3f30X_M488.pdb 3f30X/struc/3f30X_M50.pdb 3f30X/struc/3f30X_M39.pdb 3f30X/struc/3f30X_M426.pdb 3f30X/struc/3f30X_M225.pdb 3f30X/struc/3f30X_M174.pdb 3f30X/struc/3f30X_M379.pdb 3f30X/struc/3f30X_M191.pdb 3f30X/struc/3f30X_M393.pdb 3f30X/struc/3f30X_M388.pdb 3f30X/struc/3f30X_M286.pdb 3f30X/struc/3f30X_M435.pdb 3f30X/struc/3f30X_M434.pdb 3f30X/struc/3f30X_M139.pdb 3f30X/struc/3f30X_M130.pdb 3f30X/struc/3f30X_M5.pdb 3f30X/struc/3f30X_M98.pdb 3f30X/struc/3f30X_M399.pdb 3f30X/struc/3f30X_M81.pdb 3f30X/struc/3f30X_M369.pdb 3f30X/struc/3f30X_M168.pdb 3f30X/struc/3f30X_M131.pdb 3f30X/struc/3f30X_M29.pdb 3f30X/struc/3f30X_M77.pdb 3f30X/struc/3f30X_M229.pdb 3f30X/struc/3f30X_M25.pdb 3f30X/struc/3f30X_M122.pdb 3f30X/struc/3f30X_M114.pdb 3f30X/struc/3f30X_M296.pdb 3f30X/struc/3f30X_M330.pdb 3f30X/struc/3f30X_M69.pdb 3f30X/struc/3f30X_M171.pdb 3f30X/struc/3f30X_M304.pdb 3f30X/struc/3f30X_M88.pdb 3f30X/struc/3f30X_M19.pdb 3f30X/struc/3f30X_M456.pdb 3f30X/struc/3f30X_M96.pdb 3f30X/struc/3f30X_M436.pdb 3f30X/struc/3f30X_M449.pdb 3f30X/struc/3f30X_M219.pdb 3f30X/struc/3f30X_M348.pdb 3f30X/struc/3f30X_M262.pdb 3f30X/struc/3f30X_M22.pdb 3f30X/struc/3f30X_M6.pdb 3f30X/struc/3f30X_M257.pdb 3f30X/struc/3f30X_M437.pdb 3f30X/struc/3f30X_M492.pdb 3f30X/struc/3f30X_M422.pdb 3f30X/struc/3f30X_M192.pdb 3f30X/struc/3f30X_M327.pdb 3f30X/struc/3f30X_M233.pdb 3f30X/struc/3f30X_M137.pdb 3f30X/struc/3f30X_M267.pdb 3f30X/struc/3f30X_M249.pdb 3f30X/struc/3f30X_M288.pdb 3f30X/struc/3f30X_M24.pdb 3f30X/struc/3f30X_M67.pdb 3f30X/struc/3f30X_M68.pdb 3f30X/struc/3f30X_M110.pdb 3f30X/struc/3f30X_M12.pdb 3f30X/struc/3f30X_M198.pdb 3f30X/struc/3f30X_M458.pdb 3f30X/struc/3f30X_M325.pdb 3f30X/struc/3f30X_M20.pdb 3f30X/struc/3f30X_M10.pdb 3f30X/struc/3f30X_M269.pdb 3f30X/struc/3f30X_M250.pdb 3f30X/struc/3f30X_M142.pdb 3f30X/struc/3f30X_M82.pdb 3f30X/struc/3f30X_M321.pdb 3f30X/struc/3f30X_M499.pdb 3f30X/struc/3f30X_M273.pdb 3f30X/struc/3f30X_M118.pdb 3f30X/struc/3f30X_M207.pdb 3f30X/struc/3f30X_M278.pdb 3f30X/struc/3f30X_M360.pdb 3f30X/struc/3f30X_M471.pdb 3f30X/struc/3f30X_M169.pdb 3f30X/struc/3f30X_M13.pdb 3f30X/struc/3f30X_M450.pdb 3f30X/struc/3f30X_M78.pdb 3f30X/struc/3f30X_M38.pdb 3f30X/struc/3f30X_M245.pdb 3f30X/struc/3f30X_M143.pdb 3f30X/struc/3f30X_M464.pdb 3f30X/struc/3f30X_M32.pdb 3f30X/struc/3f30X_M271.pdb 3f30X/struc/3f30X_M396.pdb 3f30X/struc/3f30X_M440.pdb 3f30X/struc/3f30X_M368.pdb 3f30X/struc/3f30X_M319.pdb 3f30X/struc/3f30X_M289.pdb 3f30X/struc/3f30X_M455.pdb 3f30X/struc/3f30X_M79.pdb 3f30X/struc/3f30X_M165.pdb 3f30X/struc/3f30X_M121.pdb 3f30X/struc/3f30X_M385.pdb 3f30X/struc/3f30X_M173.pdb 3f30X/struc/3f30X_M452.pdb 3f30X/struc/3f30X_M144.pdb 3f30X/struc/3f30X_M253.pdb 3f30X/struc/3f30X_M90.pdb 3f30X/struc/3f30X_M387.pdb 3f30X/struc/3f30X_M36.pdb 3f30X/struc/3f30X_M391.pdb 3f30X/struc/3f30X_M283.pdb 3f30X/struc/3f30X_M264.pdb 3f30X/struc/3f30X_M407.pdb 3f30X/struc/3f30X_M472.pdb 3f30X/struc/3f30X_M160.pdb 3f30X/struc/3f30X_M287.pdb 3f30X/struc/3f30X_M27.pdb 3f30X/struc/3f30X_M41.pdb 3f30X/struc/3f30X_M301.pdb 3f30X/struc/3f30X_M215.pdb 3f30X/struc/3f30X_M339.pdb 3f30X/struc/3f30X_M463.pdb 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2nz4S/struc/2nz4S_M348.pdb 2nz4S/struc/2nz4S_M349.pdb 2nz4S/struc/2nz4S_M35.pdb 2nz4S/struc/2nz4S_M352.pdb 2nz4S/struc/2nz4S_M353.pdb 2nz4S/struc/2nz4S_M354.pdb 2nz4S/struc/2nz4S_M355.pdb 2nz4S/struc/2nz4S_M356.pdb 2nz4S/struc/2nz4S_M357.pdb 2nz4S/struc/2nz4S_M358.pdb 2nz4S/struc/2nz4S_M359.pdb 2nz4S/struc/2nz4S_M36.pdb 2nz4S/struc/2nz4S_M360.pdb 2nz4S/struc/2nz4S_M364.pdb 2nz4S/struc/2nz4S_M365.pdb 2nz4S/struc/2nz4S_M366.pdb 2nz4S/struc/2nz4S_M367.pdb 2nz4S/struc/2nz4S_M368.pdb 2nz4S/struc/2nz4S_M369.pdb 2nz4S/struc/2nz4S_M370.pdb 2nz4S/struc/2nz4S_M371.pdb 2nz4S/struc/2nz4S_M373.pdb 2nz4S/struc/2nz4S_M375.pdb 2nz4S/struc/2nz4S_M376.pdb 2nz4S/struc/2nz4S_M377.pdb 2nz4S/struc/2nz4S_M379.pdb 2nz4S/struc/2nz4S_M38.pdb 2nz4S/struc/2nz4S_M380.pdb 2nz4S/struc/2nz4S_M381.pdb 2nz4S/struc/2nz4S_M382.pdb 2nz4S/struc/2nz4S_M383.pdb 2nz4S/struc/2nz4S_M385.pdb 2nz4S/struc/2nz4S_M386.pdb 2nz4S/struc/2nz4S_M388.pdb 2nz4S/struc/2nz4S_M389.pdb 2nz4S/struc/2nz4S_M39.pdb 2nz4S/struc/2nz4S_M390.pdb 2nz4S/struc/2nz4S_M393.pdb 2nz4S/struc/2nz4S_M394.pdb 2nz4S/struc/2nz4S_M395.pdb 2nz4S/struc/2nz4S_M396.pdb 2nz4S/struc/2nz4S_M397.pdb 2nz4S/struc/2nz4S_M398.pdb 2nz4S/struc/2nz4S_M4.pdb 2nz4S/struc/2nz4S_M400.pdb 2nz4S/struc/2nz4S_M401.pdb 2nz4S/struc/2nz4S_M402.pdb 2nz4S/struc/2nz4S_M404.pdb 2nz4S/struc/2nz4S_M405.pdb 2nz4S/struc/2nz4S_M406.pdb 2nz4S/struc/2nz4S_M407.pdb 2nz4S/struc/2nz4S_M408.pdb 2nz4S/struc/2nz4S_M409.pdb 2nz4S/struc/2nz4S_M41.pdb 2nz4S/struc/2nz4S_M410.pdb 2nz4S/struc/2nz4S_M413.pdb 2nz4S/struc/2nz4S_M414.pdb 2nz4S/struc/2nz4S_M415.pdb 2nz4S/struc/2nz4S_M416.pdb 2nz4S/struc/2nz4S_M420.pdb 2nz4S/struc/2nz4S_M421.pdb 2nz4S/struc/2nz4S_M423.pdb 2nz4S/struc/2nz4S_M425.pdb 2nz4S/struc/2nz4S_M426.pdb 2nz4S/struc/2nz4S_M427.pdb 2nz4S/struc/2nz4S_M430.pdb 2nz4S/struc/2nz4S_M431.pdb 2nz4S/struc/2nz4S_M432.pdb 2nz4S/struc/2nz4S_M433.pdb 2nz4S/struc/2nz4S_M434.pdb 2nz4S/struc/2nz4S_M436.pdb 2nz4S/struc/2nz4S_M438.pdb 2nz4S/struc/2nz4S_M439.pdb 2nz4S/struc/2nz4S_M44.pdb 2nz4S/struc/2nz4S_M440.pdb 2nz4S/struc/2nz4S_M441.pdb 2nz4S/struc/2nz4S_M442.pdb 2nz4S/struc/2nz4S_M443.pdb 2nz4S/struc/2nz4S_M445.pdb 2nz4S/struc/2nz4S_M449.pdb 2nz4S/struc/2nz4S_M45.pdb 2nz4S/struc/2nz4S_M451.pdb 2nz4S/struc/2nz4S_M452.pdb 2nz4S/struc/2nz4S_M453.pdb 2nz4S/struc/2nz4S_M456.pdb 2nz4S/struc/2nz4S_M457.pdb 2nz4S/struc/2nz4S_M459.pdb 2nz4S/struc/2nz4S_M460.pdb 2nz4S/struc/2nz4S_M461.pdb 2nz4S/struc/2nz4S_M463.pdb 2nz4S/struc/2nz4S_M464.pdb 2nz4S/struc/2nz4S_M465.pdb 2nz4S/struc/2nz4S_M466.pdb 2nz4S/struc/2nz4S_M467.pdb 2nz4S/struc/2nz4S_M468.pdb 2nz4S/struc/2nz4S_M47.pdb 2nz4S/struc/2nz4S_M471.pdb 2nz4S/struc/2nz4S_M472.pdb 2nz4S/struc/2nz4S_M473.pdb 2nz4S/struc/2nz4S_M474.pdb 2nz4S/struc/2nz4S_M475.pdb 2nz4S/struc/2nz4S_M476.pdb 2nz4S/struc/2nz4S_M477.pdb 2nz4S/struc/2nz4S_M478.pdb 2nz4S/struc/2nz4S_M48.pdb 2nz4S/struc/2nz4S_M480.pdb 2nz4S/struc/2nz4S_M481.pdb 2nz4S/struc/2nz4S_M482.pdb 2nz4S/struc/2nz4S_M483.pdb 2nz4S/struc/2nz4S_M484.pdb 2nz4S/struc/2nz4S_M485.pdb 2nz4S/struc/2nz4S_M486.pdb 2nz4S/struc/2nz4S_M488.pdb 2nz4S/struc/2nz4S_M489.pdb 2nz4S/struc/2nz4S_M49.pdb 2nz4S/struc/2nz4S_M490.pdb 2nz4S/struc/2nz4S_M491.pdb 2nz4S/struc/2nz4S_M492.pdb 2nz4S/struc/2nz4S_M493.pdb 2nz4S/struc/2nz4S_M495.pdb 2nz4S/struc/2nz4S_M496.pdb 2nz4S/struc/2nz4S_M497.pdb 2nz4S/struc/2nz4S_M499.pdb 2nz4S/struc/2nz4S_M5.pdb 2nz4S/struc/2nz4S_M50.pdb 2nz4S/struc/2nz4S_M500.pdb 2nz4S/struc/2nz4S_M51.pdb 2nz4S/struc/2nz4S_M53.pdb 2nz4S/struc/2nz4S_M55.pdb 2nz4S/struc/2nz4S_M58.pdb 2nz4S/struc/2nz4S_M60.pdb 2nz4S/struc/2nz4S_M61.pdb 2nz4S/struc/2nz4S_M63.pdb 2nz4S/struc/2nz4S_M67.pdb 2nz4S/struc/2nz4S_M68.pdb 2nz4S/struc/2nz4S_M69.pdb 2nz4S/struc/2nz4S_M7.pdb 2nz4S/struc/2nz4S_M70.pdb 2nz4S/struc/2nz4S_M72.pdb 2nz4S/struc/2nz4S_M73.pdb 2nz4S/struc/2nz4S_M74.pdb 2nz4S/struc/2nz4S_M75.pdb 2nz4S/struc/2nz4S_M79.pdb 2nz4S/struc/2nz4S_M8.pdb 2nz4S/struc/2nz4S_M80.pdb 2nz4S/struc/2nz4S_M81.pdb 2nz4S/struc/2nz4S_M83.pdb 2nz4S/struc/2nz4S_M84.pdb 2nz4S/struc/2nz4S_M85.pdb 2nz4S/struc/2nz4S_M86.pdb 2nz4S/struc/2nz4S_M87.pdb 2nz4S/struc/2nz4S_M89.pdb 2nz4S/struc/2nz4S_M90.pdb 2nz4S/struc/2nz4S_M91.pdb 2nz4S/struc/2nz4S_M92.pdb 2nz4S/struc/2nz4S_M93.pdb 2nz4S/struc/2nz4S_M94.pdb 2nz4S/struc/2nz4S_M96.pdb 2nz4S/struc/2nz4S_M97.pdb 2nz4S/struc/2nz4S_M98.pdb 2qbzX/struc/2qbzX_M1.pdb 2qbzX/struc/2qbzX_M10.pdb 2qbzX/struc/2qbzX_M100.pdb 2qbzX/struc/2qbzX_M101.pdb 2qbzX/struc/2qbzX_M102.pdb 2qbzX/struc/2qbzX_M103.pdb 2qbzX/struc/2qbzX_M104.pdb 2qbzX/struc/2qbzX_M105.pdb 2qbzX/struc/2qbzX_M106.pdb 2qbzX/struc/2qbzX_M107.pdb 2qbzX/struc/2qbzX_M108.pdb 2qbzX/struc/2qbzX_M109.pdb 2qbzX/struc/2qbzX_M11.pdb 2qbzX/struc/2qbzX_M110.pdb 2qbzX/struc/2qbzX_M111.pdb 2qbzX/struc/2qbzX_M112.pdb 2qbzX/struc/2qbzX_M113.pdb 2qbzX/struc/2qbzX_M114.pdb 2qbzX/struc/2qbzX_M115.pdb 2qbzX/struc/2qbzX_M116.pdb 2qbzX/struc/2qbzX_M117.pdb 2qbzX/struc/2qbzX_M118.pdb 2qbzX/struc/2qbzX_M119.pdb 2qbzX/struc/2qbzX_M12.pdb 2qbzX/struc/2qbzX_M120.pdb 2qbzX/struc/2qbzX_M121.pdb 2qbzX/struc/2qbzX_M122.pdb 2qbzX/struc/2qbzX_M123.pdb 2qbzX/struc/2qbzX_M124.pdb 2qbzX/struc/2qbzX_M125.pdb 2qbzX/struc/2qbzX_M126.pdb 2qbzX/struc/2qbzX_M127.pdb 2qbzX/struc/2qbzX_M128.pdb 2qbzX/struc/2qbzX_M129.pdb 2qbzX/struc/2qbzX_M13.pdb 2qbzX/struc/2qbzX_M130.pdb 2qbzX/struc/2qbzX_M131.pdb 2qbzX/struc/2qbzX_M132.pdb 2qbzX/struc/2qbzX_M133.pdb 2qbzX/struc/2qbzX_M134.pdb 2qbzX/struc/2qbzX_M135.pdb 2qbzX/struc/2qbzX_M136.pdb 2qbzX/struc/2qbzX_M137.pdb 2qbzX/struc/2qbzX_M138.pdb 2qbzX/struc/2qbzX_M139.pdb 2qbzX/struc/2qbzX_M14.pdb 2qbzX/struc/2qbzX_M140.pdb 2qbzX/struc/2qbzX_M141.pdb 2qbzX/struc/2qbzX_M142.pdb 2qbzX/struc/2qbzX_M143.pdb 2qbzX/struc/2qbzX_M144.pdb 2qbzX/struc/2qbzX_M145.pdb 2qbzX/struc/2qbzX_M146.pdb 2qbzX/struc/2qbzX_M147.pdb 2qbzX/struc/2qbzX_M148.pdb 2qbzX/struc/2qbzX_M149.pdb 2qbzX/struc/2qbzX_M15.pdb 2qbzX/struc/2qbzX_M150.pdb 2qbzX/struc/2qbzX_M151.pdb 2qbzX/struc/2qbzX_M152.pdb 2qbzX/struc/2qbzX_M153.pdb 2qbzX/struc/2qbzX_M154.pdb 2qbzX/struc/2qbzX_M155.pdb 2qbzX/struc/2qbzX_M156.pdb 2qbzX/struc/2qbzX_M157.pdb 2qbzX/struc/2qbzX_M158.pdb 2qbzX/struc/2qbzX_M159.pdb 2qbzX/struc/2qbzX_M16.pdb 2qbzX/struc/2qbzX_M160.pdb 2qbzX/struc/2qbzX_M161.pdb 2qbzX/struc/2qbzX_M162.pdb 2qbzX/struc/2qbzX_M163.pdb 2qbzX/struc/2qbzX_M164.pdb 2qbzX/struc/2qbzX_M165.pdb 2qbzX/struc/2qbzX_M166.pdb 2qbzX/struc/2qbzX_M167.pdb 2qbzX/struc/2qbzX_M168.pdb 2qbzX/struc/2qbzX_M169.pdb 2qbzX/struc/2qbzX_M17.pdb 2qbzX/struc/2qbzX_M170.pdb 2qbzX/struc/2qbzX_M171.pdb 2qbzX/struc/2qbzX_M172.pdb 2qbzX/struc/2qbzX_M173.pdb 2qbzX/struc/2qbzX_M174.pdb 2qbzX/struc/2qbzX_M175.pdb 2qbzX/struc/2qbzX_M176.pdb 2qbzX/struc/2qbzX_M177.pdb 2qbzX/struc/2qbzX_M178.pdb 2qbzX/struc/2qbzX_M179.pdb 2qbzX/struc/2qbzX_M18.pdb 2qbzX/struc/2qbzX_M180.pdb 2qbzX/struc/2qbzX_M181.pdb 2qbzX/struc/2qbzX_M182.pdb 2qbzX/struc/2qbzX_M183.pdb 2qbzX/struc/2qbzX_M184.pdb 2qbzX/struc/2qbzX_M185.pdb 2qbzX/struc/2qbzX_M186.pdb 2qbzX/struc/2qbzX_M187.pdb 2qbzX/struc/2qbzX_M188.pdb 2qbzX/struc/2qbzX_M189.pdb 2qbzX/struc/2qbzX_M19.pdb 2qbzX/struc/2qbzX_M190.pdb 2qbzX/struc/2qbzX_M191.pdb 2qbzX/struc/2qbzX_M192.pdb 2qbzX/struc/2qbzX_M193.pdb 2qbzX/struc/2qbzX_M194.pdb 2qbzX/struc/2qbzX_M195.pdb 2qbzX/struc/2qbzX_M196.pdb 2qbzX/struc/2qbzX_M197.pdb 2qbzX/struc/2qbzX_M198.pdb 2qbzX/struc/2qbzX_M199.pdb 2qbzX/struc/2qbzX_M2.pdb 2qbzX/struc/2qbzX_M20.pdb 2qbzX/struc/2qbzX_M200.pdb 2qbzX/struc/2qbzX_M201.pdb 2qbzX/struc/2qbzX_M202.pdb 2qbzX/struc/2qbzX_M203.pdb 2qbzX/struc/2qbzX_M204.pdb 2qbzX/struc/2qbzX_M205.pdb 2qbzX/struc/2qbzX_M206.pdb 2qbzX/struc/2qbzX_M207.pdb 2qbzX/struc/2qbzX_M208.pdb 2qbzX/struc/2qbzX_M209.pdb 2qbzX/struc/2qbzX_M21.pdb 2qbzX/struc/2qbzX_M210.pdb 2qbzX/struc/2qbzX_M211.pdb 2qbzX/struc/2qbzX_M212.pdb 2qbzX/struc/2qbzX_M213.pdb 2qbzX/struc/2qbzX_M214.pdb 2qbzX/struc/2qbzX_M215.pdb 2qbzX/struc/2qbzX_M216.pdb 2qbzX/struc/2qbzX_M217.pdb 2qbzX/struc/2qbzX_M218.pdb 2qbzX/struc/2qbzX_M219.pdb 2qbzX/struc/2qbzX_M22.pdb 2qbzX/struc/2qbzX_M220.pdb 2qbzX/struc/2qbzX_M221.pdb 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3traA/struc/3traA_M66.pdb 3traA/struc/3traA_M69.pdb 3traA/struc/3traA_M80.pdb 3traA/struc/3traA_M81.pdb 3traA/struc/3traA_M93.pdb 3traA/struc/3traA_M96.pdb 3traA/struc/3traA_M98.pdb 437dA/struc/437dA_M100.pdb 437dA/struc/437dA_M102.pdb 437dA/struc/437dA_M103.pdb 437dA/struc/437dA_M104.pdb 437dA/struc/437dA_M107.pdb 437dA/struc/437dA_M113.pdb 437dA/struc/437dA_M116.pdb 437dA/struc/437dA_M118.pdb 437dA/struc/437dA_M121.pdb 437dA/struc/437dA_M122.pdb 437dA/struc/437dA_M129.pdb 437dA/struc/437dA_M131.pdb 437dA/struc/437dA_M135.pdb 437dA/struc/437dA_M137.pdb 437dA/struc/437dA_M138.pdb 437dA/struc/437dA_M14.pdb 437dA/struc/437dA_M141.pdb 437dA/struc/437dA_M145.pdb 437dA/struc/437dA_M148.pdb 437dA/struc/437dA_M156.pdb 437dA/struc/437dA_M157.pdb 437dA/struc/437dA_M17.pdb 437dA/struc/437dA_M173.pdb 437dA/struc/437dA_M176.pdb 437dA/struc/437dA_M180.pdb 437dA/struc/437dA_M186.pdb 437dA/struc/437dA_M189.pdb 437dA/struc/437dA_M190.pdb 437dA/struc/437dA_M194.pdb 437dA/struc/437dA_M196.pdb 437dA/struc/437dA_M2.pdb 437dA/struc/437dA_M207.pdb 437dA/struc/437dA_M21.pdb 437dA/struc/437dA_M214.pdb 437dA/struc/437dA_M217.pdb 437dA/struc/437dA_M219.pdb 437dA/struc/437dA_M220.pdb 437dA/struc/437dA_M226.pdb 437dA/struc/437dA_M227.pdb 437dA/struc/437dA_M228.pdb 437dA/struc/437dA_M230.pdb 437dA/struc/437dA_M232.pdb 437dA/struc/437dA_M236.pdb 437dA/struc/437dA_M240.pdb 437dA/struc/437dA_M242.pdb 437dA/struc/437dA_M244.pdb 437dA/struc/437dA_M246.pdb 437dA/struc/437dA_M249.pdb 437dA/struc/437dA_M25.pdb 437dA/struc/437dA_M251.pdb 437dA/struc/437dA_M252.pdb 437dA/struc/437dA_M255.pdb 437dA/struc/437dA_M257.pdb 437dA/struc/437dA_M260.pdb 437dA/struc/437dA_M263.pdb 437dA/struc/437dA_M266.pdb 437dA/struc/437dA_M268.pdb 437dA/struc/437dA_M270.pdb 437dA/struc/437dA_M271.pdb 437dA/struc/437dA_M272.pdb 437dA/struc/437dA_M273.pdb 437dA/struc/437dA_M276.pdb 437dA/struc/437dA_M281.pdb 437dA/struc/437dA_M283.pdb 437dA/struc/437dA_M299.pdb 437dA/struc/437dA_M30.pdb 437dA/struc/437dA_M301.pdb 437dA/struc/437dA_M305.pdb 437dA/struc/437dA_M311.pdb 437dA/struc/437dA_M315.pdb 437dA/struc/437dA_M316.pdb 437dA/struc/437dA_M317.pdb 437dA/struc/437dA_M318.pdb 437dA/struc/437dA_M319.pdb 437dA/struc/437dA_M326.pdb 437dA/struc/437dA_M328.pdb 437dA/struc/437dA_M329.pdb 437dA/struc/437dA_M335.pdb 437dA/struc/437dA_M339.pdb 437dA/struc/437dA_M342.pdb 437dA/struc/437dA_M348.pdb 437dA/struc/437dA_M350.pdb 437dA/struc/437dA_M353.pdb 437dA/struc/437dA_M357.pdb 437dA/struc/437dA_M358.pdb 437dA/struc/437dA_M360.pdb 437dA/struc/437dA_M363.pdb 437dA/struc/437dA_M364.pdb 437dA/struc/437dA_M366.pdb 437dA/struc/437dA_M37.pdb 437dA/struc/437dA_M375.pdb 437dA/struc/437dA_M376.pdb 437dA/struc/437dA_M379.pdb 437dA/struc/437dA_M387.pdb 437dA/struc/437dA_M388.pdb 437dA/struc/437dA_M393.pdb 437dA/struc/437dA_M398.pdb 437dA/struc/437dA_M399.pdb 437dA/struc/437dA_M4.pdb 437dA/struc/437dA_M402.pdb 437dA/struc/437dA_M403.pdb 437dA/struc/437dA_M404.pdb 437dA/struc/437dA_M405.pdb 437dA/struc/437dA_M413.pdb 437dA/struc/437dA_M42.pdb 437dA/struc/437dA_M426.pdb 437dA/struc/437dA_M428.pdb 437dA/struc/437dA_M43.pdb 437dA/struc/437dA_M433.pdb 437dA/struc/437dA_M434.pdb 437dA/struc/437dA_M435.pdb 437dA/struc/437dA_M441.pdb 437dA/struc/437dA_M446.pdb 437dA/struc/437dA_M45.pdb 437dA/struc/437dA_M453.pdb 437dA/struc/437dA_M454.pdb 437dA/struc/437dA_M456.pdb 437dA/struc/437dA_M458.pdb 437dA/struc/437dA_M46.pdb 437dA/struc/437dA_M460.pdb 437dA/struc/437dA_M462.pdb 437dA/struc/437dA_M466.pdb 437dA/struc/437dA_M470.pdb 437dA/struc/437dA_M478.pdb 437dA/struc/437dA_M484.pdb 437dA/struc/437dA_M489.pdb 437dA/struc/437dA_M491.pdb 437dA/struc/437dA_M492.pdb 437dA/struc/437dA_M499.pdb 437dA/struc/437dA_M51.pdb 437dA/struc/437dA_M55.pdb 437dA/struc/437dA_M57.pdb 437dA/struc/437dA_M59.pdb 437dA/struc/437dA_M79.pdb 437dA/struc/437dA_M8.pdb 437dA/struc/437dA_M86.pdb 437dA/struc/437dA_M88.pdb 437dA/struc/437dA_M89.pdb 437dA/struc/437dA_M96.pdb 437dA/struc/437dA_M98.pdb 6tnaA/struc/6tnaA_M100.pdb 6tnaA/struc/6tnaA_M101.pdb 6tnaA/struc/6tnaA_M102.pdb 6tnaA/struc/6tnaA_M103.pdb 6tnaA/struc/6tnaA_M104.pdb 6tnaA/struc/6tnaA_M106.pdb 6tnaA/struc/6tnaA_M107.pdb 6tnaA/struc/6tnaA_M110.pdb 6tnaA/struc/6tnaA_M112.pdb 6tnaA/struc/6tnaA_M113.pdb 6tnaA/struc/6tnaA_M115.pdb 6tnaA/struc/6tnaA_M116.pdb 6tnaA/struc/6tnaA_M117.pdb 6tnaA/struc/6tnaA_M120.pdb 6tnaA/struc/6tnaA_M121.pdb 6tnaA/struc/6tnaA_M122.pdb 6tnaA/struc/6tnaA_M124.pdb 6tnaA/struc/6tnaA_M125.pdb 6tnaA/struc/6tnaA_M128.pdb 6tnaA/struc/6tnaA_M130.pdb 6tnaA/struc/6tnaA_M131.pdb 6tnaA/struc/6tnaA_M132.pdb 6tnaA/struc/6tnaA_M133.pdb 6tnaA/struc/6tnaA_M134.pdb 6tnaA/struc/6tnaA_M135.pdb 6tnaA/struc/6tnaA_M137.pdb 6tnaA/struc/6tnaA_M138.pdb 6tnaA/struc/6tnaA_M143.pdb 6tnaA/struc/6tnaA_M146.pdb 6tnaA/struc/6tnaA_M149.pdb 6tnaA/struc/6tnaA_M15.pdb 6tnaA/struc/6tnaA_M153.pdb 6tnaA/struc/6tnaA_M155.pdb 6tnaA/struc/6tnaA_M156.pdb 6tnaA/struc/6tnaA_M157.pdb 6tnaA/struc/6tnaA_M158.pdb 6tnaA/struc/6tnaA_M16.pdb 6tnaA/struc/6tnaA_M161.pdb 6tnaA/struc/6tnaA_M162.pdb 6tnaA/struc/6tnaA_M164.pdb 6tnaA/struc/6tnaA_M166.pdb 6tnaA/struc/6tnaA_M168.pdb 6tnaA/struc/6tnaA_M17.pdb 6tnaA/struc/6tnaA_M170.pdb 6tnaA/struc/6tnaA_M171.pdb 6tnaA/struc/6tnaA_M172.pdb 6tnaA/struc/6tnaA_M173.pdb 6tnaA/struc/6tnaA_M174.pdb 6tnaA/struc/6tnaA_M176.pdb 6tnaA/struc/6tnaA_M177.pdb 6tnaA/struc/6tnaA_M178.pdb 6tnaA/struc/6tnaA_M179.pdb 6tnaA/struc/6tnaA_M180.pdb 6tnaA/struc/6tnaA_M181.pdb 6tnaA/struc/6tnaA_M183.pdb 6tnaA/struc/6tnaA_M184.pdb 6tnaA/struc/6tnaA_M185.pdb 6tnaA/struc/6tnaA_M186.pdb 6tnaA/struc/6tnaA_M187.pdb 6tnaA/struc/6tnaA_M189.pdb 6tnaA/struc/6tnaA_M19.pdb 6tnaA/struc/6tnaA_M190.pdb 6tnaA/struc/6tnaA_M192.pdb 6tnaA/struc/6tnaA_M193.pdb 6tnaA/struc/6tnaA_M194.pdb 6tnaA/struc/6tnaA_M196.pdb 6tnaA/struc/6tnaA_M199.pdb 6tnaA/struc/6tnaA_M20.pdb 6tnaA/struc/6tnaA_M200.pdb 6tnaA/struc/6tnaA_M202.pdb 6tnaA/struc/6tnaA_M203.pdb 6tnaA/struc/6tnaA_M205.pdb 6tnaA/struc/6tnaA_M206.pdb 6tnaA/struc/6tnaA_M207.pdb 6tnaA/struc/6tnaA_M209.pdb 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6tnaA/struc/6tnaA_M464.pdb 6tnaA/struc/6tnaA_M466.pdb 6tnaA/struc/6tnaA_M467.pdb 6tnaA/struc/6tnaA_M468.pdb 6tnaA/struc/6tnaA_M469.pdb 6tnaA/struc/6tnaA_M47.pdb 6tnaA/struc/6tnaA_M471.pdb 6tnaA/struc/6tnaA_M472.pdb 6tnaA/struc/6tnaA_M473.pdb 6tnaA/struc/6tnaA_M474.pdb 6tnaA/struc/6tnaA_M475.pdb 6tnaA/struc/6tnaA_M476.pdb 6tnaA/struc/6tnaA_M477.pdb 6tnaA/struc/6tnaA_M479.pdb 6tnaA/struc/6tnaA_M48.pdb 6tnaA/struc/6tnaA_M481.pdb 6tnaA/struc/6tnaA_M482.pdb 6tnaA/struc/6tnaA_M483.pdb 6tnaA/struc/6tnaA_M484.pdb 6tnaA/struc/6tnaA_M485.pdb 6tnaA/struc/6tnaA_M486.pdb 6tnaA/struc/6tnaA_M487.pdb 6tnaA/struc/6tnaA_M488.pdb 6tnaA/struc/6tnaA_M490.pdb 6tnaA/struc/6tnaA_M491.pdb 6tnaA/struc/6tnaA_M492.pdb 6tnaA/struc/6tnaA_M493.pdb 6tnaA/struc/6tnaA_M494.pdb 6tnaA/struc/6tnaA_M495.pdb 6tnaA/struc/6tnaA_M497.pdb 6tnaA/struc/6tnaA_M5.pdb 6tnaA/struc/6tnaA_M50.pdb 6tnaA/struc/6tnaA_M52.pdb 6tnaA/struc/6tnaA_M53.pdb 6tnaA/struc/6tnaA_M54.pdb 6tnaA/struc/6tnaA_M57.pdb 6tnaA/struc/6tnaA_M62.pdb 6tnaA/struc/6tnaA_M63.pdb 6tnaA/struc/6tnaA_M66.pdb 6tnaA/struc/6tnaA_M67.pdb 6tnaA/struc/6tnaA_M68.pdb 6tnaA/struc/6tnaA_M69.pdb 6tnaA/struc/6tnaA_M7.pdb 6tnaA/struc/6tnaA_M70.pdb 6tnaA/struc/6tnaA_M72.pdb 6tnaA/struc/6tnaA_M73.pdb 6tnaA/struc/6tnaA_M75.pdb 6tnaA/struc/6tnaA_M76.pdb 6tnaA/struc/6tnaA_M77.pdb 6tnaA/struc/6tnaA_M79.pdb 6tnaA/struc/6tnaA_M82.pdb 6tnaA/struc/6tnaA_M83.pdb 6tnaA/struc/6tnaA_M84.pdb 6tnaA/struc/6tnaA_M86.pdb 6tnaA/struc/6tnaA_M89.pdb 6tnaA/struc/6tnaA_M9.pdb 6tnaA/struc/6tnaA_M90.pdb 6tnaA/struc/6tnaA_M92.pdb 6tnaA/struc/6tnaA_M93.pdb 6tnaA/struc/6tnaA_M94.pdb 6tnaA/struc/6tnaA_M95.pdb 6tnaA/struc/6tnaA_M96.pdb 6tnaA/struc/6tnaA_M97.pdb 6tnaA/struc/6tnaA_M99.pdb diff --git a/rna_tools/tools/automatix/rm_csvs_smaller_than_2k.sh b/rna_tools/tools/automatix/rm_csvs_smaller_than_2k.sh new file mode 100644 index 000000000..2153a7d51 --- /dev/null +++ b/rna_tools/tools/automatix/rm_csvs_smaller_than_2k.sh @@ -0,0 +1 @@ +find -name "*.csv" -size -2k diff --git a/rna_tools/tools/automatix/rm_less_2k.sh b/rna_tools/tools/automatix/rm_less_2k.sh new file mode 100644 index 000000000..2153a7d51 --- /dev/null +++ b/rna_tools/tools/automatix/rm_less_2k.sh @@ -0,0 +1 @@ +find -name "*.csv" -size -2k diff --git a/rna_tools/tools/automatix/rp13_automatix.py b/rna_tools/tools/automatix/rp13_automatix.py new file mode 100644 index 000000000..6acd1ec0a --- /dev/null +++ b/rna_tools/tools/automatix/rp13_automatix.py @@ -0,0 +1,76 @@ +#!/usr/bin/env python +# -*- coding: utf-8 -*- +""" +/home/magnus/rna-evo-malibu/ade # run here not up +""" +from __future__ import print_function + +import argparse +import os +import glob + + +def get_parser(): + parser = argparse.ArgumentParser( + description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) + + parser.add_argument('-d', "--dryrun", + action="store_true", help="dry run", default=False) + + parser.add_argument('-p', '--path', help="", default='') + parser.add_argument('-c', '--case', help="only one case, for test") + parser.add_argument('-e', '--exe', help="only one case, for test") + parser.add_argument("-v", "--verbose", + action="store_true", help="be verbose") + return parser + +def exe(cmd, dryrun=False): + print(cmd) + if not dryrun: os.system(cmd) + +if __name__ == '__main__': + parser = get_parser() + args = parser.parse_args() + + if args.path: + os.chdir(args.path) + root = os.getcwd() + cases = glob.glob('*') + for c in cases: + # print('Case: ', c) + # mode only for a specific case + os.chdir(root) # change to run and go to another case + if args.case: # only if this is used + if c != args.case: + if args.verbose: print('!!! skip ' + c + '!!!') + continue + + # if not break ed, use this + if os.path.isdir(c): + print ('Inside %s' % c) + os.chdir(c) # go inside a folder + if args.exe: + exe(args.exe) + #subcases = glob.glob('*.fa') + #for sc in subcases: + ## for i in [1000]: # + ## exe('rm *min.out.*.pdb', dryrun) + ## exe('mkdir %s_top%i' % (c, i), dryrun) + ## exe('extract_lowscore_decoys.py *min.out %i' % (i), dryrun) + ## exe('mv -v *min.out.*.pdb %s_top%i' % (c, i), dryrun) + ## os.chdir(root) + malibu_folder = c.replace('_cst', 'cst').replace('farna_', '') + print(c, malibu_folder) + # exe('trash top100') + exe('mkdir top100') + exe('pwd') + os.chdir('top100') # cd top100 didn't work ?! + exe('rsync -v malibu:"~/rna-evo-malibu/_rp13_Stanford/_reg_vs_cst/%s/*.pdb" . ' % malibu_folder) + exe('rm c.*pdb') + exe('rm *out.1[0-9][1-9]*.pdb') + exe('rm *out.1[1-9]0*.pdb') + exe('rm *out.200.pdb') + exe('rm p[0-9].pdb') + exe('rna_pdb_toolsx.py --rpr --renumber_residues --inplace *') + os.chdir('..') + exe('evox.py -c rp13') diff --git a/rna_tools/tools/automatix/run b/rna_tools/tools/automatix/run new file mode 100644 index 000000000..ae1323b35 --- /dev/null +++ b/rna_tools/tools/automatix/run @@ -0,0 +1,114 @@ +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_0 3f1hB/struc/3f1hB_M204.pdb 3f1hB/struc/3f1hB_M425.pdb' | qsub -N mq0 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_1 3f1hB/struc/3f1hB_M404.pdb 3f1hB/struc/3f1hB_M330.pdb' | qsub -N mq1 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_2 3f1hB/struc/3f1hB_M57.pdb 3f1hB/struc/3f1hB_M337.pdb' | qsub -N mq2 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_3 3f1hB/struc/3f1hB_M217.pdb 3f1hB/struc/3f1hB_M213.pdb' | qsub -N mq3 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_4 3f1hB/struc/3f1hB_M141.pdb 3f1hB/struc/3f1hB_M380.pdb' | qsub -N mq4 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_5 3f1hB/struc/3f1hB_M143.pdb 3f1hB/struc/3f1hB_M465.pdb' | qsub -N mq5 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_6 3f1hB/struc/3f1hB_M48.pdb 3f1hB/struc/3f1hB_M78.pdb' | qsub -N mq6 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_7 3f1hB/struc/3f1hB_M500.pdb 3f1hB/struc/3f1hB_M450.pdb' | qsub -N mq7 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_8 3f1hB/struc/3f1hB_M384.pdb 3f1hB/struc/3f1hB_M16.pdb' | qsub -N mq8 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_9 3f1hB/struc/3f1hB_M403.pdb 3f1hB/struc/3f1hB_M198.pdb' | qsub -N mq9 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_10 3f1hB/struc/3f1hB_M87.pdb 3f1hB/struc/3f1hB_M287.pdb' | qsub -N mq10 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_11 3f1hB/struc/3f1hB_M463.pdb 3f1hB/struc/3f1hB_M372.pdb' | qsub -N mq11 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_12 3f1hB/struc/3f1hB_M304.pdb 3f1hB/struc/3f1hB_M441.pdb' | qsub -N mq12 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_13 3f1hB/struc/3f1hB_M260.pdb 3f1hB/struc/3f1hB_M432.pdb' | qsub -N mq13 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_14 3f1hB/struc/3f1hB_M180.pdb 3f1hB/struc/3f1hB_M378.pdb' | qsub -N mq14 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_15 3f1hB/struc/3f1hB_M274.pdb 3f1hB/struc/3f1hB_M479.pdb' | qsub -N mq15 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_16 3f1hB/struc/3f1hB_M70.pdb 3f1hB/struc/3f1hB_M438.pdb' | qsub -N mq16 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_17 3f1hB/struc/3f1hB_M245.pdb 3f1hB/struc/3f1hB_M448.pdb' | qsub -N mq17 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_18 3f1hB/struc/3f1hB_M409.pdb 3f1hB/struc/3f1hB_M12.pdb' | qsub -N mq18 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_19 3f1hB/struc/3f1hB_M151.pdb 3f1hB/struc/3f1hB_M110.pdb' | qsub -N mq19 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_20 3f1hB/struc/3f1hB_M185.pdb 3f1hB/struc/3f1hB_M257.pdb' | qsub -N mq20 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_21 3f1hB/struc/3f1hB_M435.pdb 3f1hB/struc/3f1hB_M246.pdb' | qsub -N mq21 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_22 3f1hB/struc/3f1hB_M219.pdb 3f1hB/struc/3f1hB_M81.pdb' | qsub -N mq22 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_23 3f1hB/struc/3f1hB_M208.pdb 3f1hB/struc/3f1hB_M389.pdb' | qsub -N mq23 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_24 3f1hB/struc/3f1hB_M363.pdb 3f1hB/struc/3f1hB_M440.pdb' | qsub -N mq24 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_25 3f1hB/struc/3f1hB_M117.pdb 3f1hB/struc/3f1hB_M63.pdb' | qsub -N mq25 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_26 3f1hB/struc/3f1hB_M2.pdb 3f1hB/struc/3f1hB_M360.pdb' | qsub -N mq26 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_27 3f1hB/struc/3f1hB_M431.pdb 3f1hB/struc/3f1hB_M452.pdb' | qsub -N mq27 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_28 3f1hB/struc/3f1hB_M353.pdb 3f1hB/struc/3f1hB_M224.pdb' | qsub -N mq28 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_29 3f1hB/struc/3f1hB_M340.pdb 3f1hB/struc/3f1hB_M135.pdb' | qsub -N mq29 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_30 3f1hB/struc/3f1hB_M228.pdb 3f1hB/struc/3f1hB_M174.pdb' | qsub -N mq30 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_31 3f1hB/struc/3f1hB_M152.pdb 3f1hB/struc/3f1hB_M216.pdb' | qsub -N mq31 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_32 3f1hB/struc/3f1hB_M49.pdb 3f1hB/struc/3f1hB_M284.pdb' | qsub -N mq32 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_33 3f1hB/struc/3f1hB_M273.pdb 3f1hB/struc/3f1hB_M328.pdb' | qsub -N mq33 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_34 3f1hB/struc/3f1hB_M475.pdb 3f1hB/struc/3f1hB_M104.pdb' | qsub -N mq34 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_35 3f1hB/struc/3f1hB_M53.pdb 3f1hB/struc/3f1hB_M227.pdb' | qsub -N mq35 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_36 3f1hB/struc/3f1hB_M173.pdb 3f1hB/struc/3f1hB_M329.pdb' | qsub -N mq36 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_37 3f1hB/struc/3f1hB_M58.pdb 3f1hB/struc/3f1hB_M83.pdb' | qsub -N mq37 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_38 3f1hB/struc/3f1hB_M7.pdb 3f1hB/struc/3f1hB_M418.pdb' | qsub -N mq38 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_39 3f1hB/struc/3f1hB_M331.pdb 3f1hB/struc/3f1hB_M415.pdb' | qsub -N mq39 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_40 3f1hB/struc/3f1hB_M39.pdb 3f1hB/struc/3f1hB_M60.pdb' | qsub -N mq40 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_41 3f1hB/struc/3f1hB_M412.pdb 3f1hB/struc/3f1hB_M9.pdb' | qsub -N mq41 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_42 3f1hB/struc/3f1hB_M458.pdb 3f1hB/struc/3f1hB_M294.pdb' | qsub -N mq42 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_43 3f1hB/struc/3f1hB_M453.pdb 3f1hB/struc/3f1hB_M168.pdb' | qsub -N mq43 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_44 3f1hB/struc/3f1hB_M147.pdb 3f1hB/struc/3f1hB_M237.pdb' | qsub -N mq44 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_45 3f1hB/struc/3f1hB_M207.pdb 3f1hB/struc/3f1hB_M390.pdb' | qsub -N mq45 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_46 3f1hB/struc/3f1hB_M232.pdb 3f1hB/struc/3f1hB_M200.pdb' | qsub -N mq46 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_47 3f1hB/struc/3f1hB_M126.pdb 3f1hB/struc/3f1hB_M121.pdb' | qsub -N mq47 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_48 3f1hB/struc/3f1hB_M343.pdb 3f1hB/struc/3f1hB_M408.pdb' | qsub -N mq48 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_49 3f1hB/struc/3f1hB_M93.pdb 3f1hB/struc/3f1hB_M221.pdb' | qsub -N mq49 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_50 3f1hB/struc/3f1hB_M347.pdb 3f1hB/struc/3f1hB_M206.pdb' | qsub -N mq50 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_51 3f1hB/struc/3f1hB_M280.pdb 3f1hB/struc/3f1hB_M146.pdb' | qsub -N mq51 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_52 3f1hB/struc/3f1hB_M128.pdb 3f1hB/struc/3f1hB_M267.pdb' | qsub -N mq52 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_53 3f1hB/struc/3f1hB_M188.pdb 3f1hB/struc/3f1hB_M398.pdb' | qsub -N mq53 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_54 3f1hB/struc/3f1hB_M103.pdb 3f1hB/struc/3f1hB_M97.pdb' | qsub -N mq54 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_55 3f1hB/struc/3f1hB_M332.pdb 3f1hB/struc/3f1hB_M222.pdb' | qsub -N mq55 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_56 3f1hB/struc/3f1hB_M410.pdb 3f1hB/struc/3f1hB_M249.pdb' | qsub -N mq56 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_57 3f1hB/struc/3f1hB_M113.pdb 3f1hB/struc/3f1hB_M424.pdb' | qsub -N mq57 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_58 3f1hB/struc/3f1hB_M88.pdb 3f1hB/struc/3f1hB_M127.pdb' | qsub -N mq58 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_59 3f1hB/struc/3f1hB_M120.pdb 3f1hB/struc/3f1hB_M129.pdb' | qsub -N mq59 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_60 3f1hB/struc/3f1hB_M239.pdb 3f1hB/struc/3f1hB_M29.pdb' | qsub -N mq60 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_61 3f1hB/struc/3f1hB_M32.pdb 3f1hB/struc/3f1hB_M169.pdb' | qsub -N mq61 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_62 3f1hB/struc/3f1hB_M405.pdb 3f1hB/struc/3f1hB_M381.pdb' | qsub -N mq62 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_63 3f1hB/struc/3f1hB_M47.pdb 3f1hB/struc/3f1hB_M84.pdb' | qsub -N mq63 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_64 3f1hB/struc/3f1hB_M350.pdb 3f1hB/struc/3f1hB_M262.pdb' | qsub -N mq64 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_65 3f1hB/struc/3f1hB_M357.pdb 3f1hB/struc/3f1hB_M489.pdb' | qsub -N mq65 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_66 3f1hB/struc/3f1hB_M485.pdb 3f1hB/struc/3f1hB_M191.pdb' | qsub -N mq66 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_67 3f1hB/struc/3f1hB_M429.pdb 3f1hB/struc/3f1hB_M44.pdb' | qsub -N mq67 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_68 3f1hB/struc/3f1hB_M189.pdb 3f1hB/struc/3f1hB_M85.pdb' | qsub -N mq68 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_69 3f1hB/struc/3f1hB_M125.pdb 3f1hB/struc/3f1hB_M20.pdb' | qsub -N mq69 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_70 3f1hB/struc/3f1hB_M214.pdb 3f1hB/struc/3f1hB_M5.pdb' | qsub -N mq70 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_71 3f1hB/struc/3f1hB_M278.pdb 3f1hB/struc/3f1hB_M469.pdb' | qsub -N mq71 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_72 3f1hB/struc/3f1hB_M355.pdb 3f1hB/struc/3f1hB_M478.pdb' | qsub -N mq72 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_73 3f1hB/struc/3f1hB_M321.pdb 3f1hB/struc/3f1hB_M323.pdb' | qsub -N mq73 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_74 3f1hB/struc/3f1hB_M423.pdb 3f1hB/struc/3f1hB_M183.pdb' | qsub -N mq74 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_75 3f1hB/struc/3f1hB_M165.pdb 3f1hB/struc/3f1hB_M449.pdb' | qsub -N mq75 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_76 3f1hB/struc/3f1hB_M96.pdb 3f1hB/struc/3f1hB_M244.pdb' | qsub -N mq76 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_77 3f1hB/struc/3f1hB_M307.pdb 3f1hB/struc/3f1hB_M211.pdb' | qsub -N mq77 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_78 3f1hB/struc/3f1hB_M266.pdb 3f1hB/struc/3f1hB_M496.pdb' | qsub -N mq78 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_79 3f1hB/struc/3f1hB_M338.pdb 3f1hB/struc/3f1hB_M349.pdb' | qsub -N mq79 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_80 3f1hB/struc/3f1hB_M133.pdb 3f1hB/struc/3f1hB_M498.pdb' | qsub -N mq80 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_81 3f1hB/struc/3f1hB_M252.pdb 3f1hB/struc/3f1hB_M137.pdb' | qsub -N mq81 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_82 3f1hB/struc/3f1hB_M250.pdb 3f1hB/struc/3f1hB_M140.pdb' | qsub -N mq82 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_83 3f1hB/struc/3f1hB_M215.pdb 3f1hB/struc/3f1hB_M172.pdb' | qsub -N mq83 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_84 3f1hB/struc/3f1hB_M112.pdb 3f1hB/struc/3f1hB_M290.pdb' | qsub -N mq84 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_85 3f1hB/struc/3f1hB_M40.pdb 3f1hB/struc/3f1hB_M41.pdb' | qsub -N mq85 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_86 3f1hB/struc/3f1hB_M36.pdb 3f1hB/struc/3f1hB_M43.pdb' | qsub -N mq86 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_87 3f1hB/struc/3f1hB_M354.pdb 3f1hB/struc/3f1hB_M317.pdb' | qsub -N mq87 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_88 3f1hB/struc/3f1hB_M383.pdb 3f1hB/struc/3f1hB_M263.pdb' | qsub -N mq88 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_89 3f1hB/struc/3f1hB_M437.pdb 3f1hB/struc/3f1hB_M241.pdb' | qsub -N mq89 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_90 3f1hB/struc/3f1hB_M495.pdb 3f1hB/struc/3f1hB_M138.pdb' | qsub -N mq90 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_91 3f1hB/struc/3f1hB_M171.pdb 3f1hB/struc/3f1hB_M359.pdb' | qsub -N mq91 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_92 3f1hB/struc/3f1hB_M226.pdb 3f1hB/struc/3f1hB_M130.pdb' | qsub -N mq92 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_93 3f1hB/struc/3f1hB_M300.pdb 3f1hB/struc/3f1hB_M92.pdb' | qsub -N mq93 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_94 3f1hB/struc/3f1hB_M167.pdb 3f1hB/struc/3f1hB_M361.pdb' | qsub -N mq94 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_95 3f1hB/struc/3f1hB_M46.pdb 3f1hB/struc/3f1hB_M101.pdb' | qsub -N mq95 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_96 3f1hB/struc/3f1hB_M480.pdb 3f1hB/struc/3f1hB_M474.pdb' | qsub -N mq96 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_97 3f1hB/struc/3f1hB_M160.pdb 3f1hB/struc/3f1hB_M392.pdb' | qsub -N mq97 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_98 3f1hB/struc/3f1hB_M439.pdb 3f1hB/struc/3f1hB_M35.pdb' | qsub -N mq98 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_99 3f1hB/struc/3f1hB_M72.pdb 3f1hB/struc/3f1hB_M301.pdb' | qsub -N mq99 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_100 3f1hB/struc/3f1hB_M385.pdb 3f1hB/struc/3f1hB_M24.pdb' | qsub -N mq100 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_101 3f1hB/struc/3f1hB_M417.pdb 3f1hB/struc/3f1hB_M377.pdb' | qsub -N mq101 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_102 3f1hB/struc/3f1hB_M358.pdb 3f1hB/struc/3f1hB_M111.pdb' | qsub -N mq102 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_103 3f1hB/struc/3f1hB_M352.pdb 3f1hB/struc/3f1hB_M277.pdb' | qsub -N mq103 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_104 3f1hB/struc/3f1hB_M25.pdb 3f1hB/struc/3f1hB_M282.pdb' | qsub -N mq104 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_105 3f1hB/struc/3f1hB_M132.pdb 3f1hB/struc/3f1hB_M443.pdb' | qsub -N mq105 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_106 3f1hB/struc/3f1hB_M163.pdb 3f1hB/struc/3f1hB_M145.pdb' | qsub -N mq106 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_107 3f1hB/struc/3f1hB_M270.pdb 3f1hB/struc/3f1hB_M445.pdb' | qsub -N mq107 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_108 3f1hB/struc/3f1hB_M394.pdb 3f1hB/struc/3f1hB_M155.pdb' | qsub -N mq108 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_109 3f1hB/struc/3f1hB_M460.pdb 3f1hB/struc/3f1hB_M316.pdb' | qsub -N mq109 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_110 3f1hB/struc/3f1hB_M324.pdb 3f1hB/struc/3f1hB_M238.pdb' | qsub -N mq110 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_111 3f1hB/struc/3f1hB_M364.pdb 3f1hB/struc/3f1hB_M86.pdb' | qsub -N mq111 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_112 3f1hB/struc/3f1hB_M65.pdb 3f1hB/struc/3f1hB_M447.pdb' | qsub -N mq112 -V -cwd -pe mpi 1 +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -o FARNA__hires_113 3f1hB/struc/3f1hB_M422.pdb 3f1hB/struc/3f1hB_M258.pdb' | qsub -N mq113 -V -cwd -pe mpi 1 diff --git a/rna_tools/tools/automatix/run.sh b/rna_tools/tools/automatix/run.sh new file mode 100644 index 000000000..c6e911997 --- /dev/null +++ b/rna_tools/tools/automatix/run.sh @@ -0,0 +1,6 @@ +for i in ` find . -iname 'struc'`; +do + cd $i + parallel /Users/magnus/work/src/rna-tools/rna_tools/tools/mq/rsRNASP/run_rsRNASP ::: *.pdb # > rsRNASP + cd /Volumes/Toshiba/mq/decoys/_others_/rasp/rasp +done diff --git a/rna_tools/tools/automatix/run_1 b/rna_tools/tools/automatix/run_1 new file mode 100644 index 000000000..1f24f297b --- /dev/null +++ b/rna_tools/tools/automatix/run_1 @@ -0,0 +1 @@ +echo '/home/magnus/mqaprna_env/mqapRNA/main/mqaprna -g FARNA_hires-_peyote.csv -m 10 -o FARNA_hires_1 3f1hB/struc/3f1hB_M212.pdb 3f1hB/struc/3f1hB_M105.pdb 3f1hB/struc/3f1hB_M487.pdb 3f1hB/struc/3f1hB_M477.pdb 3f1hB/struc/3f1hB_M312.pdb 3f1hB/struc/3f1hB_M195.pdb 3f1hB/struc/3f1hB_M134.pdb 3f1hB/struc/3f1hB_M442.pdb 3f1hB/struc/3f1hB_M80.pdb 3f1hB/struc/3f1hB_M19.pdb 3f1hB/struc/3f1hB_M265.pdb 3f1hB/struc/3f1hB_M17.pdb 3f1hB/struc/3f1hB_M396.pdb 3f1hB/struc/3f1hB_M472.pdb 3f1hB/struc/3f1hB_M388.pdb 3f1hB/struc/3f1hB_M293.pdb 3f1hB/struc/3f1hB_M319.pdb 3f1hB/struc/3f1hB_M455.pdb 3f1hB/struc/3f1hB_M170.pdb 3f1hB/struc/3f1hB_M369.pdb 3f1hB/struc/3f1hB_M136.pdb 3f1hB/struc/3f1hB_M414.pdb 3f1hB/struc/3f1hB_M436.pdb 3f1hB/struc/3f1hB_M419.pdb 3f1hB/struc/3f1hB_M109.pdb 3f1hB/struc/3f1hB_M253.pdb 3f1hB/struc/3f1hB_M235.pdb 3f1hB/struc/3f1hB_M454.pdb 3f1hB/struc/3f1hB_M22.pdb 3f1hB/struc/3f1hB_M322.pdb 3f1hB/struc/3f1hB_M199.pdb 3f1hB/struc/3f1hB_M397.pdb 3f1hB/struc/3f1hB_M161.pdb 3f1hB/struc/3f1hB_M182.pdb 3f1hB/struc/3f1hB_M76.pdb 3f1hB/struc/3f1hB_M61.pdb 3f1hB/struc/3f1hB_M333.pdb 3f1hB/struc/3f1hB_M351.pdb 3f1hB/struc/3f1hB_M79.pdb 3f1hB/struc/3f1hB_M122.pdb 3f1hB/struc/3f1hB_M306.pdb 3f1hB/struc/3f1hB_M197.pdb 3f1hB/struc/3f1hB_M62.pdb 3f1hB/struc/3f1hB_M407.pdb 3f1hB/struc/3f1hB_M302.pdb 3f1hB/struc/3f1hB_M482.pdb 3f1hB/struc/3f1hB_M30.pdb 3f1hB/struc/3f1hB_M382.pdb 3f1hB/struc/3f1hB_M164.pdb 3f1hB/struc/3f1hB_M255.pdb 3f1hB/struc/3f1hB_M233.pdb 3f1hB/struc/3f1hB_M203.pdb 3f1hB/struc/3f1hB_M451.pdb 3f1hB/struc/3f1hB_M297.pdb 3f1hB/struc/3f1hB_M194.pdb 3f1hB/struc/3f1hB_M131.pdb 3f1hB/struc/3f1hB_M50.pdb 3f1hB/struc/3f1hB_M339.pdb 3f1hB/struc/3f1hB_M334.pdb 3f1hB/struc/3f1hB_M483.pdb 3f1hB/struc/3f1hB_M124.pdb 3f1hB/struc/3f1hB_M73.pdb 3f1hB/struc/3f1hB_M153.pdb 3f1hB/struc/3f1hB_M179.pdb 3f1hB/struc/3f1hB_M162.pdb 3f1hB/struc/3f1hB_M23.pdb 3f1hB/struc/3f1hB_M205.pdb 3f1hB/struc/3f1hB_M303.pdb 3f1hB/struc/3f1hB_M492.pdb 3f1hB/struc/3f1hB_M434.pdb 3f1hB/struc/3f1hB_M305.pdb 3f1hB/struc/3f1hB_M268.pdb 3f1hB/struc/3f1hB_M1.pdb 3f1hB/struc/3f1hB_M346.pdb 3f1hB/struc/3f1hB_M309.pdb 3f1hB/struc/3f1hB_M6.pdb 3f1hB/struc/3f1hB_M457.pdb 3f1hB/struc/3f1hB_M428.pdb 3f1hB/struc/3f1hB_M342.pdb 3f1hB/struc/3f1hB_M177.pdb 3f1hB/struc/3f1hB_M374.pdb 3f1hB/struc/3f1hB_M66.pdb 3f1hB/struc/3f1hB_M286.pdb 3f1hB/struc/3f1hB_M298.pdb 3f1hB/struc/3f1hB_M362.pdb 3f1hB/struc/3f1hB_M18.pdb 3f1hB/struc/3f1hB_M467.pdb 3f1hB/struc/3f1hB_M223.pdb 3f1hB/struc/3f1hB_M159.pdb 3f1hB/struc/3f1hB_M484.pdb 3f1hB/struc/3f1hB_M100.pdb 3f1hB/struc/3f1hB_M187.pdb 3f1hB/struc/3f1hB_M8.pdb 3f1hB/struc/3f1hB_M366.pdb 3f1hB/struc/3f1hB_M13.pdb 3f1hB/struc/3f1hB_M272.pdb 3f1hB/struc/3f1hB_M416.pdb 3f1hB/struc/3f1hB_M15.pdb 3f1hB/struc/3f1hB_M494.pdb 3f1hB/struc/3f1hB_M283.pdb 3f1hB/struc/3f1hB_M229.pdb 3f1hB/struc/3f1hB_M52.pdb 3f1hB/struc/3f1hB_M371.pdb 3f1hB/struc/3f1hB_M375.pdb 3f1hB/struc/3f1hB_M33.pdb 3f1hB/struc/3f1hB_M230.pdb 3f1hB/struc/3f1hB_M486.pdb 3f1hB/struc/3f1hB_M386.pdb 3f1hB/struc/3f1hB_M399.pdb 3f1hB/struc/3f1hB_M327.pdb 3f1hB/struc/3f1hB_M379.pdb 3f1hB/struc/3f1hB_M248.pdb 3f1hB/struc/3f1hB_M271.pdb 3f1hB/struc/3f1hB_M411.pdb 3f1hB/struc/3f1hB_M311.pdb 3f1hB/struc/3f1hB_M459.pdb 3f1hB/struc/3f1hB_M201.pdb 3f1hB/struc/3f1hB_M184.pdb 3f1hB/struc/3f1hB_M466.pdb 3f1hB/struc/3f1hB_M37.pdb 3f1hB/struc/3f1hB_M488.pdb 3f1hB/struc/3f1hB_M393.pdb 3f1hB/struc/3f1hB_M156.pdb 3f1hB/struc/3f1hB_M481.pdb 3f1hB/struc/3f1hB_M471.pdb 3f1hB/struc/3f1hB_M38.pdb 3f1hB/struc/3f1hB_M433.pdb 3f1hB/struc/3f1hB_M108.pdb 3f1hB/struc/3f1hB_M158.pdb 3f1hB/struc/3f1hB_M115.pdb 3f1hB/struc/3f1hB_M89.pdb 3f1hB/struc/3f1hB_M202.pdb 3f1hB/struc/3f1hB_M325.pdb 3f1hB/struc/3f1hB_M473.pdb 3f1hB/struc/3f1hB_M3.pdb 3f1hB/struc/3f1hB_M4.pdb 3f1hB/struc/3f1hB_M345.pdb 3f1hB/struc/3f1hB_M315.pdb 3f1hB/struc/3f1hB_M320.pdb 3f1hB/struc/3f1hB_M493.pdb 3f1hB/struc/3f1hB_M406.pdb 3f1hB/struc/3f1hB_M468.pdb 3f1hB/struc/3f1hB_M464.pdb 3f1hB/struc/3f1hB_M59.pdb 3f1hB/struc/3f1hB_M326.pdb 3f1hB/struc/3f1hB_M395.pdb 3f1hB/struc/3f1hB_M181.pdb 3f1hB/struc/3f1hB_M373.pdb 3f1hB/struc/3f1hB_M51.pdb 3f1hB/struc/3f1hB_M276.pdb 3f1hB/struc/3f1hB_M264.pdb 3f1hB/struc/3f1hB_M98.pdb 3f1hB/struc/3f1hB_M426.pdb 3f1hB/struc/3f1hB_M401.pdb 3f1hB/struc/3f1hB_M387.pdb 3f1hB/struc/3f1hB_M499.pdb 3f1hB/struc/3f1hB_M77.pdb 3f1hB/struc/3f1hB_M295.pdb 3f1hB/struc/3f1hB_M336.pdb 3f1hB/struc/3f1hB_M186.pdb 3f1hB/struc/3f1hB_M391.pdb 3f1hB/struc/3f1hB_M91.pdb 3f1hB/struc/3f1hB_M119.pdb 3f1hB/struc/3f1hB_M67.pdb 3f1hB/struc/3f1hB_M400.pdb 3f1hB/struc/3f1hB_M95.pdb 3f1hB/struc/3f1hB_M254.pdb 3f1hB/struc/3f1hB_M149.pdb 3f1hB/struc/3f1hB_M275.pdb 3f1hB/struc/3f1hB_M118.pdb 3f1hB/struc/3f1hB_M225.pdb 3f1hB/struc/3f1hB_M56.pdb 3f1hB/struc/3f1hB_M139.pdb 3f1hB/struc/3f1hB_M144.pdb 3f1hB/struc/3f1hB_M26.pdb 3f1hB/struc/3f1hB_M192.pdb 3f1hB/struc/3f1hB_M178.pdb 3f1hB/struc/3f1hB_M27.pdb 3f1hB/struc/3f1hB_M106.pdb 3f1hB/struc/3f1hB_M344.pdb 3f1hB/struc/3f1hB_M413.pdb 1un6F/struc/1un6F_M141.pdb 1un6F/struc/1un6F_M377.pdb 1un6F/struc/1un6F_M490.pdb 1un6F/struc/1un6F_M437.pdb 1un6F/struc/1un6F_M73.pdb 1un6F/struc/1un6F_M487.pdb 1un6F/struc/1un6F_M467.pdb 1un6F/struc/1un6F_M233.pdb 1un6F/struc/1un6F_M412.pdb 1un6F/struc/1un6F_M448.pdb 1un6F/struc/1un6F_M47.pdb 1un6F/struc/1un6F_M142.pdb 1un6F/struc/1un6F_M218.pdb 1un6F/struc/1un6F_M455.pdb 1un6F/struc/1un6F_M313.pdb 1un6F/struc/1un6F_M333.pdb 1un6F/struc/1un6F_M95.pdb 1un6F/struc/1un6F_M470.pdb 1un6F/struc/1un6F_M301.pdb 1un6F/struc/1un6F_M401.pdb 1un6F/struc/1un6F_M140.pdb 1un6F/struc/1un6F_M26.pdb 1un6F/struc/1un6F_M90.pdb 1un6F/struc/1un6F_M319.pdb 1un6F/struc/1un6F_M463.pdb 1un6F/struc/1un6F_M44.pdb 1un6F/struc/1un6F_M79.pdb 1un6F/struc/1un6F_M443.pdb 1un6F/struc/1un6F_M78.pdb 1un6F/struc/1un6F_M346.pdb 1un6F/struc/1un6F_M352.pdb 1un6F/struc/1un6F_M307.pdb 1un6F/struc/1un6F_M403.pdb 1un6F/struc/1un6F_M93.pdb 1un6F/struc/1un6F_M179.pdb 1un6F/struc/1un6F_M239.pdb 1un6F/struc/1un6F_M471.pdb 1un6F/struc/1un6F_M135.pdb 1un6F/struc/1un6F_M30.pdb 1un6F/struc/1un6F_M37.pdb 1un6F/struc/1un6F_M394.pdb 1un6F/struc/1un6F_M322.pdb 1un6F/struc/1un6F_M129.pdb 1un6F/struc/1un6F_M111.pdb 1un6F/struc/1un6F_M229.pdb 1un6F/struc/1un6F_M8.pdb 1un6F/struc/1un6F_M375.pdb 1un6F/struc/1un6F_M199.pdb 1un6F/struc/1un6F_M391.pdb 1un6F/struc/1un6F_M349.pdb 1un6F/struc/1un6F_M450.pdb 1un6F/struc/1un6F_M359.pdb 1un6F/struc/1un6F_M45.pdb 1un6F/struc/1un6F_M154.pdb 1un6F/struc/1un6F_M202.pdb 1un6F/struc/1un6F_M28.pdb 1un6F/struc/1un6F_M74.pdb 1un6F/struc/1un6F_M267.pdb 1un6F/struc/1un6F_M300.pdb 1un6F/struc/1un6F_M444.pdb 1un6F/struc/1un6F_M137.pdb 1un6F/struc/1un6F_M162.pdb 1un6F/struc/1un6F_M170.pdb 1un6F/struc/1un6F_M105.pdb 1un6F/struc/1un6F_M120.pdb 1un6F/struc/1un6F_M287.pdb 1un6F/struc/1un6F_M153.pdb 1un6F/struc/1un6F_M272.pdb 1un6F/struc/1un6F_M48.pdb 1un6F/struc/1un6F_M371.pdb 1un6F/struc/1un6F_M406.pdb 1un6F/struc/1un6F_M458.pdb 1un6F/struc/1un6F_M459.pdb 1un6F/struc/1un6F_M393.pdb 1un6F/struc/1un6F_M62.pdb 1un6F/struc/1un6F_M126.pdb 1un6F/struc/1un6F_M231.pdb 1un6F/struc/1un6F_M197.pdb 1un6F/struc/1un6F_M400.pdb 1un6F/struc/1un6F_M338.pdb 1un6F/struc/1un6F_M203.pdb 1un6F/struc/1un6F_M414.pdb 1un6F/struc/1un6F_M71.pdb 1un6F/struc/1un6F_M341.pdb 1un6F/struc/1un6F_M285.pdb 1un6F/struc/1un6F_M286.pdb 1un6F/struc/1un6F_M491.pdb 1un6F/struc/1un6F_M402.pdb 1un6F/struc/1un6F_M192.pdb 1un6F/struc/1un6F_M227.pdb 1un6F/struc/1un6F_M244.pdb 1un6F/struc/1un6F_M147.pdb 1un6F/struc/1un6F_M72.pdb 1un6F/struc/1un6F_M207.pdb 1un6F/struc/1un6F_M127.pdb 1un6F/struc/1un6F_M63.pdb 1un6F/struc/1un6F_M383.pdb 1un6F/struc/1un6F_M100.pdb 1un6F/struc/1un6F_M330.pdb 1un6F/struc/1un6F_M339.pdb 1un6F/struc/1un6F_M19.pdb 1un6F/struc/1un6F_M385.pdb 1un6F/struc/1un6F_M99.pdb 1un6F/struc/1un6F_M159.pdb 1un6F/struc/1un6F_M424.pdb 1un6F/struc/1un6F_M6.pdb 1un6F/struc/1un6F_M94.pdb 1un6F/struc/1un6F_M163.pdb 1un6F/struc/1un6F_M173.pdb 1un6F/struc/1un6F_M49.pdb 1un6F/struc/1un6F_M492.pdb 1un6F/struc/1un6F_M221.pdb 1un6F/struc/1un6F_M232.pdb 1un6F/struc/1un6F_M465.pdb 1un6F/struc/1un6F_M273.pdb 1un6F/struc/1un6F_M3.pdb 1un6F/struc/1un6F_M228.pdb 1un6F/struc/1un6F_M145.pdb 1un6F/struc/1un6F_M146.pdb 1un6F/struc/1un6F_M399.pdb 1un6F/struc/1un6F_M308.pdb 1un6F/struc/1un6F_M190.pdb 1un6F/struc/1un6F_M279.pdb 1un6F/struc/1un6F_M161.pdb 1un6F/struc/1un6F_M386.pdb 1un6F/struc/1un6F_M98.pdb 1un6F/struc/1un6F_M389.pdb 1un6F/struc/1un6F_M421.pdb 1un6F/struc/1un6F_M54.pdb 1un6F/struc/1un6F_M275.pdb 1un6F/struc/1un6F_M151.pdb 1un6F/struc/1un6F_M176.pdb 1un6F/struc/1un6F_M113.pdb 1un6F/struc/1un6F_M418.pdb 1un6F/struc/1un6F_M270.pdb 1un6F/struc/1un6F_M86.pdb 1un6F/struc/1un6F_M88.pdb 1un6F/struc/1un6F_M180.pdb' | qsub -N mq1 -cwd -pe mpi 10 \ No newline at end of file diff --git a/rna_tools/tools/automatix/test.sh b/rna_tools/tools/automatix/test.sh new file mode 100644 index 000000000..c9dca4f72 --- /dev/null +++ b/rna_tools/tools/automatix/test.sh @@ -0,0 +1 @@ +python automatix.py -c test_data --exe 'mkdir a' diff --git a/rna_tools/tools/automatix/xxdownload_job_and_process.py b/rna_tools/tools/automatix/xxdownload_job_and_process.py new file mode 100644 index 000000000..0630c536d --- /dev/null +++ b/rna_tools/tools/automatix/xxdownload_job_and_process.py @@ -0,0 +1,38 @@ +#!/usr/bin/env python +# -*- coding: utf-8 -*- +""" +Caution: the file was changed, it does not download now from simrnaweb. +""" +from __future__ import print_function +import os + +import argparse + +def get_parser(): + parser = argparse.ArgumentParser( + description=__doc__, formatter_class=argparse.RawDescriptionHelpFormatter) + + #parser.add_argument('-', "--", help="", default="") + + parser.add_argument("-v", "--verbose", + action="store_true", help="be verbose") + parser.add_argument('--dir', action="store_false") + parser.add_argument("rna", help="", default="evox.py -c ade") + parser.add_argument("simrnawebid", help="", default="") + return parser + + +if __name__ == '__main__': + parser = get_parser() + args = parser.parse_args() + + dir = 'simrna_' + args.simrnawebid + os.system('mkdir ' + dir) + os.chdir(dir) + #os.system('rna_simrnaweb_download_job.py --prefix tar --web-models ' + args.simrnawebid) + #os.system('rna_simrnaweb_download_job.py -n 200 --web-models -w ' + args.simrnawebid) + os.system('mkdir reps') + #os.system('mkdir reps_ns') + os.system('cp *.pdb reps') + #os.system('cp *.pdb reps_ns') + os.system('evox.py -c ' + args.rna)