From 93b0bbd413004ffceedc880c8ad528492c64eb1d Mon Sep 17 00:00:00 2001
From: Marcin Magnus <mag_dex@o2.pl>
Date: Sat, 12 Jun 2021 11:53:05 +0200
Subject: [PATCH] Dirrty script to run mq on my VM machine:
 mqaprna_dev_remote.sh

---
 rna_tools/tools/mq/mqaprna_dev_remote.sh | 5 +++++
 1 file changed, 5 insertions(+)
 create mode 100755 rna_tools/tools/mq/mqaprna_dev_remote.sh

diff --git a/rna_tools/tools/mq/mqaprna_dev_remote.sh b/rna_tools/tools/mq/mqaprna_dev_remote.sh
new file mode 100755
index 000000000..a503d7eeb
--- /dev/null
+++ b/rna_tools/tools/mq/mqaprna_dev_remote.sh
@@ -0,0 +1,5 @@
+folder=job`openssl rand -hex 12`
+ssh mq mkdir $folder
+rsync --delete --include '*.pdb' --exclude="*" -rv $1/* mq:$folder
+ssh mq "cd $folder && /home/mqapRNA/mqaprna_env/mqapRNA/main/mqaprna * -o mq.csv"
+rsync -r  --exclude='*.pdb'  --exclude='.csvsort*'  mq:$folder/ $1