- Test
- add test case for
rawDiagServerModule
- add test case for
- Documentation
- add Visualization section in vignette
- add shiny and FAQ section in vignette
- use EH4547(DIA) and EH3222(DDA) data from tatare pkg
- add FAQ section in vignette
- Refactor
- if trailer information is missing add NA
- Feature
- handle "Orbitrap Resolution:" in trailer
- pass
R CMD check
on bioconductor withStatus: OK
- NAMESPACE
- renamed
read.raw
toreadRaw
- renamed
- Documentation
- add an Introduction and Installation section in vignette
- removed commented code that isn't run
- Code
- removed paste cmd in message
- use the BiocParallel
- refactor rawDiag shiny application, e.g.,
buildRawDiagShinyApp
returns ashiny::shinyApp
object
- Add NEWS.md file
- refacor existing code https://github.com/fgcz/rawDiag
- use mono assemplies provides through Bioconductor rawrr package
- camel case for public plot functions, e.g., rename
PlotCycleLoad
toplotCycleLoad
- submit to bioconductor #3251
(as demonstrated in ABRF R4Core session.)
- removed data used in JPR Techical Note.
- doi 10.1021/acs.jproteome.8b00173 version.
- initial commit 4627b798.