DESCRIPTION

Package: rawDiag
Type: Package
Title: Brings Orbitrap Mass Spectrometry Data to Life; Fast and Colorful 
Version: 1.1.0
Authors@R: c(person(given = "Christian", family = "Panse",
      email = "cp@fgcz.ethz.ch", role = c("aut", "cre"),
    comment = c(ORCID = "0000-0003-1975-3064")),
	person(given = "Christian", family = "Trachsel",
	  email = "Christian.Trachsel@fgcz.ethz.ch", role = "aut"),
	person(given = "Tobias", family = "Kockmann",
	  email = "Tobias.Kockmann@fgcz.ethz.ch", role = "aut"))
Depends:
  R (>= 4.3)
Imports:
  dplyr,
  ggplot2 (>= 3.4),
  grDevices,
  hexbin,
  htmltools,
  BiocManager,
  BiocParallel,
  rawrr (>= 1.10),
  rlang,
  reshape2,
  scales,
  shiny (>= 1.5),
  stats,
  utils
Suggests:
  BiocStyle (>= 2.28),
  ExperimentHub,
  tartare,
  knitr,
  testthat
Description: Optimizing methods for liquid chromatography coupled to mass
  spectrometry (LC-MS) poses a nontrivial challenge. The rawDiag package
  facilitates rational method optimization by generating MS operator-tailored
  diagnostic plots of scan-level metadata. The package is designed for use on
  the R shell or as a Shiny application on the Orbitrap instrument PC.
License: GPL-3
URL: https://github.com/fgcz/rawDiag/
BugReports: https://github.com/fgcz/rawDiag/issues
Encoding: UTF-8
NeedsCompilation: no
RoxygenNote: 7.3.1
VignetteBuilder: knitr
biocViews: MassSpectrometry, Proteomics, Metabolomics, Infrastructure, Software, ShinyApps
SystemRequirements: mono 4.x or higher on OSX / Linux, .NET 4.x or
        higher on Windows, 'msbuild' and 'nuget' available in the path