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How to obtain CSQ #11

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lqr131115 opened this issue Jun 14, 2023 · 0 comments

lqr131115 commented Jun 14, 2023 •

edited

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Now，I get CSQ through vep, like this:

But when i run the shell

../VVP -i gnomad_chr_1_1000.vcf.gz -d gnomad.062717.build -v CSQ,4,6,1,15 1> target.spiked.vvp.out

The output target.spiked.vvp.out has nothing:

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lqr131115 mentioned this issue

how to generate percentile scores #10

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