Please provide documentation for the DiffType enum in boomerang

[matentzn]

I need three sentences how to interpret the boomerang output(s) and in particular, a sentence on

1. What are the diff types
2. What should be the action as a consequence of encountering one of these values in a row? Say I encounter "conflict", or "ambiguous" -> what does that tell me? What should the curator do in response to these?

[cmungall]

I think most of these docs belong on the boomer site, and in fact maybe the reporting can migrate there. To interpret the report you really need to understand what boomer is doing. But there are a few straightforward ones: NEW: this mapping interpretation can be added with high confidence AMBIGUOUS: the source ontology has different interpretations (e.g. exact, broad) for the same term pair. If you get this then you should tidy up your inputs CONFLICT: the source ontology mapping interpretation is different from what is inferred to be the correct one REJECT: a CONFLICT in which the source interpretation is non-exact note that the last two may be rare if non-exact priors are close in value, until we have posterior probabilities of individual interpretations INCATools/boomer#335

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On Sun, Feb 5, 2023 at 1:48 AM Nico Matentzoglu ***@***.***> wrote: I need three sentences how to interpret the boomerang output(s) and in particular, a sentence on 1. What are the diff types <https://github.com/INCATools/ontology-access-kit/blob/fc3c906f60e0bbbef2281f0122d6bbbe6ba0e51a/src/oaklib/utilities/mapping/boomer_utils.py#L37> 2. What should be the action as a consequence of encountering one of these values in a row? Say I encounter "conflict", or "ambiguous" -> what does that tell me? What should the curator do in response to these? — Reply to this email directly, view it on GitHub <#447>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAAMMOKRCAZ6CEAVZTGDRWTWV5ZQPANCNFSM6AAAAAAURVVHZM> . You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>

[matentzn]

This is excellent, thank you!